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LINC02842 long intergenic non-protein coding RNA 2842 [ Homo sapiens (human) ]

Gene ID: 101929628, updated on 25-Jan-2022

Summary

Official Symbol
LINC02842provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2842provided by HGNC
Primary source
HGNC:HGNC:54378
See related
AllianceGenome:HGNC:54378
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 2.5) See more
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Genomic context

See LINC02842 in Genome Data Viewer
Location:
8q12.3
Exon count:
27
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 8 NC_000008.11 (61785072..62100736)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene CAGE-defined mid-level expression enhancer upstream of ASPH Neighboring gene HNF1 motif-containing MPRA enhancer 71 Neighboring gene uncharacterized LOC105375871 Neighboring gene NFE2L2 motif-containing MPRA enhancer 61 Neighboring gene long intergenic non-protein coding RNA 2155 Neighboring gene C1GALT1 pseudogene 3 Neighboring gene asparaginyl-tRNA synthetase 1 pseudogene 2 Neighboring gene serine/threonine-protein kinase PLK1-like

Genomic regions, transcripts, and products

Genomic Sequence:
NC_000008.11 Chromosome 8 Reference GRCh38.p13 Primary Assembly

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p13 Primary Assembly

    Range
    61785072..62100736
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001745927.1 RNA Sequence

  2. XR_928962.2 RNA Sequence

  3. XR_928961.2 RNA Sequence

  4. XR_001745926.2 RNA Sequence

  5. XR_428354.3 RNA Sequence

  6. XR_928963.1 RNA Sequence

  7. XR_428353.3 RNA Sequence

  8. XR_928956.2 RNA Sequence

  9. XR_428350.3 RNA Sequence

  10. XR_928966.1 RNA Sequence

  11. XR_928967.1 RNA Sequence

  12. XR_928958.1 RNA Sequence

  13. XR_928959.1 RNA Sequence

  14. XR_928957.1 RNA Sequence

  15. XR_928955.1 RNA Sequence

  16. XR_928953.1 RNA Sequence

  17. XR_928965.2 RNA Sequence

  18. XR_928954.3 RNA Sequence

  19. XR_928968.1 RNA Sequence

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