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PRRX2-AS1 PRRX2 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 101929437, updated on 10-Dec-2019

Summary

Official Symbol
PRRX2-AS1provided by HGNC
Official Full Name
PRRX2 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:50684
See related
Ensembl:ENSG00000236024
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 5.0) See more

Genomic context

See PRRX2-AS1 in Genome Data Viewer
Location:
9q34.11
Exon count:
2
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 9 NC_000009.12 (129712894..129718706, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (132475181..132480957, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene chromosome 9 open reading frame 50 Neighboring gene N-terminal Xaa-Pro-Lys N-methyltransferase 1 Neighboring gene ankyrin repeat and SOCS box containing 6 Neighboring gene paired related homeobox 2 Neighboring gene prostaglandin E synthase Neighboring gene Sharpr-MPRA regulatory region 14524

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_132102.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA993927, BX110190, HY035685
    Related
    ENST00000440413.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p13 Primary Assembly

    Range
    129712894..129718706 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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