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LINC01231 long intergenic non-protein coding RNA 1231 [ Homo sapiens (human) ]

Gene ID: 101929247, updated on 12-Oct-2019

Summary

Official Symbol
LINC01231provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1231provided by HGNC
Primary source
HGNC:HGNC:49688
See related
Ensembl:ENSG00000236511
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more

Genomic context

See LINC01231 in Genome Data Viewer
Location:
9p24.2
Exon count:
5
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) 9 NC_000009.12 (3181589..3200500)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (3181589..3200500)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene ATP synthase peripheral stalk subunit d pseudogene 2 Neighboring gene coactivator associated arginine methyltransferase 1 pseudogene 1 Neighboring gene uncharacterized LOC105375959 Neighboring gene regulatory factor X3 Neighboring gene VISTA enhancer hs1350 Neighboring gene RFX3 antisense RNA 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_121585.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL133549, BC041456
    Related
    ENST00000654614.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20190905

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p13 Primary Assembly

    Range
    3181589..3200500
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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