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CFAP20DC-AS1 CFAP20DC antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 101929238, updated on 25-Jan-2022

Summary

Official Symbol
CFAP20DC-AS1provided by HGNC
Official Full Name
CFAP20DC antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:41063
See related
Ensembl:ENSG00000242428 AllianceGenome:HGNC:41063
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C3orf67-AS1
Expression
Low expression observed in reference dataset See more
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Genomic context

See CFAP20DC-AS1 in Genome Data Viewer
Location:
3p14.2
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 3 NC_000003.12 (58824471..59019093)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (58810197..59004819)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 107 member A Neighboring gene FAM3D antisense RNA 1 Neighboring gene uncharacterized LOC105377109 Neighboring gene FAM3 metabolism regulating signaling molecule D Neighboring gene CFAP20 domain containing Neighboring gene CFAP20DC divergent transcript Neighboring gene small nuclear ribonucleoprotein polypeptide B2 pseudogene Neighboring gene Sharpr-MPRA regulatory region 3507

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110820.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC104300, AK090895
    Related
    ENST00000482372.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p13 Primary Assembly

    Range
    58824471..59019093
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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