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LINC02994 long intergenic non-protein coding RNA 2994 [ Homo sapiens (human) ]

Gene ID: 101928978, updated on 13-May-2022

Summary

Official Symbol
LINC02994provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2994provided by HGNC
Primary source
HGNC:HGNC:56109
See related
Ensembl:ENSG00000250546
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC02994 in Genome Data Viewer
Location:
4q21.23
Exon count:
9
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (83968082..84299169, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (87297989..87629143, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (84889235..85220322, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene VISTA enhancer hs712 Neighboring gene uncharacterized LOC105377315 Neighboring gene heart enhancer 9 Neighboring gene RNA, U6 small nuclear 774, pseudogene Neighboring gene PLAG1 like zinc finger 2 pseudogene Neighboring gene VISTA enhancer hs680 Neighboring gene Sharpr-MPRA regulatory region 8005

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_125909.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC114764, AK095285
    Related
    ENST00000508406.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    83968082..84299169 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    87297989..87629143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)