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LINC01637 long intergenic non-protein coding RNA 1637 [ Homo sapiens (human) ]

Gene ID: 101928891, updated on 19-Jul-2022

Summary

Official Symbol
LINC01637provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1637provided by HGNC
Primary source
HGNC:HGNC:52424
See related
Ensembl:ENSG00000237476 AllianceGenome:HGNC:52424
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in colon (RPKM 3.4), duodenum (RPKM 1.5) and 12 other tissues See more
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Genomic context

See LINC01637 in Genome Data Viewer
Location:
22q11.21
Exon count:
2
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (20957092..20964680)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (21365914..21373499)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (21311380..21318968)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 10319 Neighboring gene synaptosome associated protein 29 Neighboring gene CRK like proto-oncogene, adaptor protein Neighboring gene small nucleolar RNA U3 Neighboring gene apoptosis inducing factor mitochondria associated 3 Neighboring gene Sharpr-MPRA regulatory region 818 Neighboring gene leucine zipper like transcription regulator 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Pathways from PubChem

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110537.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC002470
    Related
    ENST00000444039.2

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    20957092..20964680
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    21365914..21373499
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)