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HIPK1-AS1 HIPK1 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 101928846, updated on 23-Nov-2021

Summary

Official Symbol
HIPK1-AS1provided by HGNC
Official Full Name
HIPK1 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:50576
See related
Ensembl:ENSG00000235527
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 1.3), bone marrow (RPKM 0.2) and 11 other tissues See more
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Genomic context

See HIPK1-AS1 in Genome Data Viewer
Location:
1p13.2
Exon count:
6
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (113924001..113929525, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (114466623..114472147, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene adaptor related protein complex 4 subunit beta 1 Neighboring gene DNA cross-link repair 1B Neighboring gene GATA motif-containing MPRA enhancer 196 Neighboring gene homeodomain interacting protein kinase 1 Neighboring gene olfactomedin like 3 Neighboring gene ribosomal protein L13a pseudogene 10

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110725.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AL137856, BC036361
    Related
    ENST00000450706.1
  2. NR_110726.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks two internal exons and uses an alternate 5' most exon compared to variant 1.
    Source sequence(s)
    BC036361, HY108301

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    113924001..113929525 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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