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LINC01657 long intergenic non-protein coding RNA 1657 [ Homo sapiens (human) ]

Gene ID: 101928751, updated on 11-Jun-2021

Summary

Official Symbol
LINC01657provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1657provided by HGNC
Primary source
HGNC:HGNC:52445
See related
Ensembl:ENSG00000224718
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC01657 in Genome Data Viewer
Location:
1q25.1
Exon count:
3
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (175877343..175880464)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (175846479..175849600)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371623 Neighboring gene ribosomal protein S29 pseudogene 4 Neighboring gene tenascin R Neighboring gene long intergenic non-protein coding RNA 2803 Neighboring gene ribosomal protein S29 pseudogene 5 Neighboring gene microRNA 1843 Neighboring gene small Cajal body-specific RNA 3 Neighboring gene COP1 E3 ubiquitin ligase

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_125964.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL139411
    Related
    ENST00000457217.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    175877343..175880464
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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