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BMAL2-AS1 BMAL2 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 101928646, updated on 29-Mar-2023

Summary

Official Symbol
BMAL2-AS1provided by HGNC
Official Full Name
BMAL2 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:49892
See related
Ensembl:ENSG00000245311 AllianceGenome:HGNC:49892
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ARNTL2-AS1
Expression
Broad expression in esophagus (RPKM 1.8), appendix (RPKM 0.6) and 17 other tissues See more
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Genomic context

See BMAL2-AS1 in Genome Data Viewer
Location:
12p11.23
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_03 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (27389789..27446634, complement)
RS_2023_03 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (27261411..27318304, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (27542722..27599567, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene serine/threonine kinase 38 like Neighboring gene uncharacterized LOC124902905 Neighboring gene uncharacterized LOC124902906 Neighboring gene basic helix-loop-helix ARNT like 2 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr12:27589181-27589746 Neighboring gene single-pass membrane protein with coiled-coil domains 2 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr12:27627037-27628236 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:27631436-27631936

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_109975.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC043511, BU568793
    Related
    ENST00000500498.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    27389789..27446634 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    27261411..27318304 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)