U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC101928565 uncharacterized LOC101928565 [ Homo sapiens (human) ]

Gene ID: 101928565, updated on 10-Oct-2023

Summary

Gene symbol
LOC101928565
Gene description
uncharacterized LOC101928565
See related
Ensembl:ENSG00000228697
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LOC101928565 in Genome Data Viewer
Location:
1q24.2
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (168464114..168495640, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (167817632..167850756, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (168433352..168464882, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100505918 Neighboring gene uncharacterized LOC125312414 Neighboring gene OCT4 hESC enhancer GRCh37_chr1:168397241-168397782 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1544 Neighboring gene QRSL1 pseudogene 1 Neighboring gene MPRA-validated peak443 silencer Neighboring gene MPRA-validated peak444 silencer Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr1:168479196-168480395 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr1:168481645-168482844 Neighboring gene ribosomal protein L7a pseudogene 19 Neighboring gene X-C motif chemokine ligand 2 Neighboring gene ribosomal protein L7a pseudogene 21 Neighboring gene X-C motif chemokine ligand 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_125956.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL023755
    Related
    ENST00000422253.1
  2. NR_176056.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL023755
    Related
    ENST00000693652.2
  3. NR_176057.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL023755
    Related
    ENST00000660568.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    168464114..168495640 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    167817632..167850756 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)