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LINC02268 long intergenic non-protein coding RNA 2268 [ Homo sapiens (human) ]

Gene ID: 101928509, updated on 17-Jun-2024

Summary

Official Symbol
LINC02268provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2268provided by HGNC
Primary source
HGNC:HGNC:53183
See related
Ensembl:ENSG00000248174 AllianceGenome:HGNC:53183
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC02268 in Genome Data Viewer
Location:
4q34.1
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (174094660..174220398, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (177434457..177560236, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (175015811..175141549, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377546 Neighboring gene NANOG hESC enhancer GRCh37_chr4:174963824-174964381 Neighboring gene uncharacterized LOC107986204 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22161 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr4:175135627-175136287 Neighboring gene F-box protein 8 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:175205027-175205294 Neighboring gene centrosomal protein 44

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_125896.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK125257
    Related
    ENST00000515444.5

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    174094660..174220398 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    177434457..177560236 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)