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LINC01411 long intergenic non-protein coding RNA 1411 [ Homo sapiens (human) ]

Gene ID: 101928176, updated on 23-Nov-2021

Summary

Official Symbol
LINC01411provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1411provided by HGNC
Primary source
HGNC:HGNC:50703
See related
Ensembl:ENSG00000249306
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC01411 in Genome Data Viewer
Location:
5q35.2
Exon count:
6
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 5 NC_000005.10 (174336354..174527139)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (173763357..173954142)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene ribosomal protein L12 pseudogene 22 Neighboring gene uncharacterized LOC102724551 Neighboring gene neuronal vesicle trafficking associated 2 Neighboring gene uncharacterized LOC107986483 Neighboring gene cysteine rich transmembrane module containing 1 pseudogene Neighboring gene uncharacterized LOC105377739 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene 71 Neighboring gene SUMO2 pseudogene 6 Neighboring gene uncharacterized LOC105377740

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_125806.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC108104, AC108112, BG330133, BM051440, BU620825
    Related
    ENST00000510234.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p13 Primary Assembly

    Range
    174336354..174527139
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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