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HRAT17 heart tissue-associated transcript 17 [ Homo sapiens (human) ]

Gene ID: 101928036, updated on 13-May-2022

Summary

Gene symbol
HRAT17
Gene description
heart tissue-associated transcript 17
See related
Ensembl:ENSG00000234520
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward heart (RPKM 17.0) See more
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Genomic context

See HRAT17 in Genome Data Viewer
Location:
7q31.1
Exon count:
6
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (112954635..112995643, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (114273565..114314656, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (112594690..112635698, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124901729 Neighboring gene base methyltransferase of 25S rRNA 2 homolog Neighboring gene uncharacterized LOC107986837 Neighboring gene G protein-coupled receptor 85 Neighboring gene small integral membrane protein 30

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Conduct disorder and ADHD: evaluation of conduct problems as a categorical and quantitative trait in the international multicentre ADHD genetics study.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110162.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AA707363, AA992588, BX116119
    Related
    ENST00000451962.5

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    112954635..112995643 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    114273565..114314656 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)