Format

Send to:

Choose Destination

LINC01480 long intergenic non-protein coding RNA 1480 [ Homo sapiens (human) ]

Gene ID: 101927931, updated on 23-Nov-2021

Summary

Official Symbol
LINC01480provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1480provided by HGNC
Primary source
HGNC:HGNC:51124
See related
Ensembl:ENSG00000270164
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in lymph node (RPKM 6.4), endometrium (RPKM 5.6) and 14 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LINC01480 in Genome Data Viewer
Location:
19q13.2
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (41535498..41536904)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (42041860..42043266)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene tropomyosin 3 pseudogene 5 Neighboring gene pleckstrin homology domain containing A3 pseudogene 1 Neighboring gene CEA cell adhesion molecule 21 Neighboring gene Sharpr-MPRA regulatory region 9744 Neighboring gene RNA, 28S ribosomal pseudogene Neighboring gene uncharacterized LOC105372404 Neighboring gene CEA cell adhesion molecule pseudogene 3

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110724.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC243960
    Related
    ENST00000494375.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    41535498..41536904
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_1

Genomic

  1. NT_187620.1 Reference GRCh38.p13 ALT_REF_LOCI_1

    Range
    145097..146504 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center