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LOC101927855 uncharacterized LOC101927855 [ Homo sapiens (human) ]

Gene ID: 101927855, updated on 10-Oct-2023

Summary

Gene symbol
LOC101927855
Gene description
uncharacterized LOC101927855
See related
Ensembl:ENSG00000267131
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LOC101927855 in Genome Data Viewer
Location:
17q23.2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (61361668..61367704, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (62230531..62236566, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (59439029..59445065, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene BCAS3 microtubule associated cell migration factor Neighboring gene BCAS3 antisense RNA 1 Neighboring gene uncharacterized LOC124904041 Neighboring gene ribosomal protein L23a pseudogene 74 Neighboring gene ReSE screen-validated silencer GRCh37_chr17:59200454-59200632 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr17:59322561-59323086 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr17:59323087-59323612 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:59360941-59361441 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:59392337-59392838 Neighboring gene Sharpr-MPRA regulatory region 10586 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr17:59429722-59430668 Neighboring gene Sharpr-MPRA regulatory region 2758 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:59457237-59457737 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:59474489-59475040 Neighboring gene TBX2 promoter region Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:59482769-59483666 Neighboring gene TBX2 antisense RNA 1 Neighboring gene T-box transcription factor 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_136397.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005746, BX115170
    Related
    ENST00000585765.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    61361668..61367704 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    62230531..62236566 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)