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LINC02202 long intergenic non-protein coding RNA 2202 [ Homo sapiens (human) ]

Gene ID: 101927740, updated on 13-May-2022

Summary

Official Symbol
LINC02202provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2202provided by HGNC
Primary source
HGNC:HGNC:53068
See related
Ensembl:ENSG00000245812 AllianceGenome:HGNC:53068
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in fat (RPKM 3.1), placenta (RPKM 0.6) and 16 other tissues See more
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Genomic context

See LINC02202 in Genome Data Viewer
Location:
5q33.3
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (159100483..159117478)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (159629277..159646279)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (158527491..158544486)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene EBF transcription factor 1 Neighboring gene VISTA enhancer hs1117 Neighboring gene VISTA enhancer hs1123 Neighboring gene uncharacterized LOC107986467 Neighboring gene ring finger protein 145 Neighboring gene uncharacterized LOC107986468 Neighboring gene small nucleolar RNA SNORA68 Neighboring gene long intergenic non-protein coding RNA 1932

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_109890.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC134043
    Related
    ENST00000499583.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    159100483..159117478
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    159629277..159646279
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)