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LINC01361 long intergenic non-protein coding RNA 1361 [ Homo sapiens (human) ]

Gene ID: 101927498, updated on 25-Nov-2025
Official Symbol
LINC01361provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1361provided by HGNC
Primary source
HGNC:HGNC:50595
See related
Ensembl:ENSG00000236268 AllianceGenome:HGNC:50595
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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See LINC01361 in Genome Data Viewer
Location:
1p31.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2025_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (82973882..82986208, complement)
RS_2025_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (82814210..82826532, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (83439565..83451891, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105378814 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr1:83240976-83242175 Neighboring gene uncharacterized LOC107985396 Neighboring gene VISTA enhancer hs442 Neighboring gene long intergenic non-protein coding RNA 1362 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1241 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:83633156-83633656 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:83633657-83634157 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:83647525-83648108 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:83728934-83729516 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:83729517-83730099 Neighboring gene uncharacterized LOC105378816 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:83893396-83893919 Neighboring gene long intergenic non-protein coding RNA 1712

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

Related articles in PubMed

  1. Molecular evolution of an ancient mariner transposon, Hsmar1, in the human genome. Robertson HM, et al. Gene, 1997 Dec 31. PMID 9461395
  2. Generation and analysis of 280,000 human expressed sequence tags. Hillier LD, et al. Genome Res, 1996 Sep. PMID 8889549

GeneRIFs: Gene References Into Functions

Review eQTL and phenotype association data in this region using PheGenI

See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110632.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript.
    Source sequence(s)
    BC037222
    Related
    ENST00000452834.6

  2. NR_110633.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate 5' most exon and is shorter compared to variant 1.
    Source sequence(s)
    BC037222, U80773
    Related
    ENST00000421931.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2025_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    82973882..82986208 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    82814210..82826532 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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