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CLYBL-AS1 CLYBL antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 101927465, updated on 12-Oct-2019

Summary

Official Symbol
CLYBL-AS1provided by HGNC
Official Full Name
CLYBL antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:39893
See related
Ensembl:ENSG00000234303
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 2.0) See more

Genomic context

See CLYBL-AS1 in Genome Data Viewer
Location:
13q32.3
Exon count:
4
Annotation release Status Assembly Chr Location
109.20190905 current GRCh38.p13 (GCF_000001405.39) 13 NC_000013.11 (99725668..99729001, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (100378497..100381239, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene citrate lyase beta like Neighboring gene microRNA 4306 Neighboring gene CLYBL antisense RNA 2 Neighboring gene uncharacterized LOC101927437 Neighboring gene Zic family member 5

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046525.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 3' terminal exon, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AA719038, CR738309, HY028066
  2. NR_120383.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AI149873, BX117342, CR738309, HY028066
  3. NR_120384.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) uses an alternate splice site at an internal exon and differs in the 3' terminal exon, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AA412612, AA719038, CR741020, HY028066
    Related
    ENST00000670609.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109.20190905

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p13 Primary Assembly

    Range
    99725668..99729001 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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