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LINC01255 long intergenic non-protein coding RNA 1255 [ Homo sapiens (human) ]

Gene ID: 101927433, updated on 23-Nov-2021

Summary

Official Symbol
LINC01255provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1255provided by HGNC
Primary source
HGNC:HGNC:49871
See related
Ensembl:ENSG00000267252
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 4.7) See more
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Genomic context

See LINC01255 in Genome Data Viewer
Location:
18p11.21
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 18 NC_000018.10 (11488570..11506983)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (11488569..11506982)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371995 Neighboring gene uncharacterized LOC107985173 Neighboring gene long intergenic non-protein coding RNA 1928 Neighboring gene solute carrier family 35 member G4 Neighboring gene nuclear pore complex interacting protein family member B1, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

Associated conditions

Description Tests
Genome-wide association study of clinical dimensions of schizophrenia: polygenic effect on disorganized symptoms.
GeneReviews: Not available

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110778.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AP001017
    Related
    ENST00000586947.6
  2. NR_110779.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an exon and contain two alternate 5' exons, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AP001017

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p13 Primary Assembly

    Range
    11488570..11506983
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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