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LINC02208 long intergenic non-protein coding RNA 2208 [ Homo sapiens (human) ]

Gene ID: 101927280, updated on 25-Jan-2022

Summary

Official Symbol
LINC02208provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2208provided by HGNC
Primary source
HGNC:HGNC:52978
See related
AllianceGenome:HGNC:52978
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HRAT56
Expression
Restricted expression toward heart (RPKM 2.3) See more
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Genomic context

See LINC02208 in Genome Data Viewer
Location:
5q23.1
Exon count:
10
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 5 NC_000005.10 (118350966..118562117, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (117686661..117897812, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2147 Neighboring gene ribosomal protein L7 like 1 pseudogene 4 Neighboring gene long intergenic non-protein coding RNA 2148 Neighboring gene long intergenic non-protein coding RNA 2216 Neighboring gene long intergenic non-protein coding RNA 2215

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • CTD-2281M20.1
  • heart tissue-associated transcript 56

Clone Names

  • DKFZp779A1168

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_104610.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC114279, AC114311, AC136426

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p13 Primary Assembly

    Range
    118350966..118562117 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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