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LMO7-AS1 LMO7 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 101927155, updated on 23-Nov-2021

Summary

Official Symbol
LMO7-AS1provided by HGNC
Official Full Name
LMO7 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:50277
See related
Ensembl:ENSG00000261105
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
UCHL3-AS1
Expression
Ubiquitous expression in thyroid (RPKM 3.9), testis (RPKM 2.4) and 25 other tissues See more
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Genomic context

See LMO7-AS1 in Genome Data Viewer
Location:
13q22.2
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 13 NC_000013.11 (75604700..75635994, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (76178836..76210130, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 4 Neighboring gene COMM domain containing 6 Neighboring gene ubiquitin C-terminal hydrolase L3 Neighboring gene LIM domain 7 Neighboring gene family with sequence similarity 204 member C, pseudogene Neighboring gene LMO7DN intronic transcript 1 Neighboring gene LMO7 downstream neighbor

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_120410.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript.
    Source sequence(s)
    AI816891, AL137244
  2. NR_120411.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an alternate internal exon, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AL137244, AW188034
    Related
    ENST00000568302.5
  3. NR_120412.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) lacks two alternate internal exons, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AL137244, AW188034, BF593247

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p13 Primary Assembly

    Range
    75604700..75635994 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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