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LINC02207 long intergenic non-protein coding RNA 2207 [ Homo sapiens (human) ]

Gene ID: 101927153, updated on 17-Jun-2024

Summary

Official Symbol
LINC02207provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2207provided by HGNC
Primary source
HGNC:HGNC:53073
See related
Ensembl:ENSG00000258476 AllianceGenome:HGNC:53073
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in testis (RPKM 3.0), appendix (RPKM 0.5) and 4 other tissues See more
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Genomic context

See LINC02207 in Genome Data Viewer
Location:
15q26.2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (93856560..93878356)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (91618475..91640271)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (94399789..94421585)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124900612 Neighboring gene uncharacterized LOC107983974 Neighboring gene NANOG hESC enhancer GRCh37_chr15:94372653-94373188 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr15:94461979-94462560 Neighboring gene long intergenic non-protein coding RNA 1579 Neighboring gene long intergenic non-protein coding RNA 1580 Neighboring gene long intergenic non-protein coding RNA 1581 Neighboring gene VISTA enhancer hs1686

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_120321.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC103996
    Related
    ENST00000666582.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    93856560..93878356
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    91618475..91640271
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)