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LINC01359 long intergenic non-protein coding RNA 1359 [ Homo sapiens (human) ]

Gene ID: 101927084, updated on 23-Nov-2021

Summary

Official Symbol
LINC01359provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1359provided by HGNC
Primary source
HGNC:HGNC:50591
See related
Ensembl:ENSG00000226891
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC01359 in Genome Data Viewer
Location:
1p31.3
Exon count:
7
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (64979577..65002476, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (65445260..65468159, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene Janus kinase 1 Neighboring gene NDUFA4, mitochondrial complex associated pseudogene Neighboring gene Sharpr-MPRA regulatory region 2453 Neighboring gene solute carrier family 2 member 3 pseudogene 2 Neighboring gene RNA, U6 small nuclear 1176, pseudogene Neighboring gene microRNA 3671

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
TSPYL5 SNPs: association with plasma estradiol concentrations and aromatase expression.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_119383.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL606517, BC035370, BI825893, HY226751
    Related
    ENST00000415842.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    64979577..65002476 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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