Format

Send to:

Choose Destination

PDXP-DT PDXP divergent transcript [ Homo sapiens (human) ]

Gene ID: 101927051, updated on 23-Nov-2021

Summary

Official Symbol
PDXP-DTprovided by HGNC
Official Full Name
PDXP divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:40525
See related
Ensembl:ENSG00000233360
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in spleen (RPKM 5.3), appendix (RPKM 5.2) and 23 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See PDXP-DT in Genome Data Viewer
Location:
22q13.1
Exon count:
6
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 22 NC_000022.11 (37641832..37658377, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (38037839..38054384, complement)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene CRISPRi-validated cis-regulatory element chr22.1757 Neighboring gene golgi associated, gamma adaptin ear containing, ARF binding protein 1 Neighboring gene SH3 domain binding protein 1 Neighboring gene pyridoxal phosphatase Neighboring gene RNA, 7SL, cytoplasmic 385, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_109952.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    Z83844
    Related
    ENST00000456099.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p13 Primary Assembly

    Range
    37641832..37658377 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center