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PRKAR1B-AS1 PRKAR1B antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 101926963, updated on 23-Nov-2021

Summary

Official Symbol
PRKAR1B-AS1provided by HGNC
Official Full Name
PRKAR1B antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:40470
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Broad expression in lymph node (RPKM 1.7), spleen (RPKM 1.6) and 22 other tissues See more
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Genomic context

See PRKAR1B-AS1 in Genome Data Viewer
Location:
7p22.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 7 NC_000007.14 (602845..608502)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (642482..648139)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene platelet derived growth factor subunit A Neighboring gene PDGFA divergent transcript Neighboring gene PRKAR1B antisense RNA 2 Neighboring gene protein kinase cAMP-dependent type I regulatory subunit beta Neighboring gene uncharacterized LOC105375119 Neighboring gene dynein axonemal assembly factor 5

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110054.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AW450880, BX114951, CD365074
  2. NR_110055.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) contains an alternate 5' terminal exon, compared to variant 1.
    Source sequence(s)
    AW450880, BY993667, CD365074

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p13 Primary Assembly

    Range
    602845..608502
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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