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CRAT37 cervical cancer-associated transcript 37 [ Homo sapiens (human) ]

Gene ID: 101926928, updated on 10-Dec-2024

Summary

Gene symbol
CRAT37
Gene description
cervical cancer-associated transcript 37
See related
Ensembl:ENSG00000258551
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See CRAT37 in Genome Data Viewer
Location:
15q26.1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (91463339..91494850)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (89224115..89255643)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (92006569..92038080)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:91586547-91587048 Neighboring gene golgin A2 pseudogene Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr15:91642723-91643264 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6838 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:91653317-91653843 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:91653844-91654369 Neighboring gene ReSE screen-validated silencer GRCh37_chr15:91656268-91656428 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10108 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10109 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr15:91698560-91699759 Neighboring gene synaptic vesicle glycoprotein 2B Neighboring gene uncharacterized LOC105370972 Neighboring gene Sharpr-MPRA regulatory region 12031 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr15:91885743-91886942 Neighboring gene uncharacterized LOC107984778 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10110 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:92042895-92043798 Neighboring gene Sharpr-MPRA regulatory region 1362 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:92170550-92171050 Neighboring gene uncharacterized LOC105370973 Neighboring gene tRNA-Tyr (anticodon GTA) 12-1

Genomic regions, transcripts, and products

Expression

  • Project title: Tissue-specific circular RNA induction during human fetal development
  • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
  • BioProject: PRJNA270632
  • Publication: PMID 26076956
  • Analysis date: Mon Apr 2 22:54:59 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_110106.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC104035, BC036442
    Related
    ENST00000554333.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    91463339..91494850
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    89224115..89255643
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)