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ARNT2 aryl hydrocarbon receptor nuclear translocator 2 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 101925178, updated on 3-Apr-2024

Summary

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Gene symbol
ARNT2
Gene description
aryl hydrocarbon receptor nuclear translocator 2
See related
Ensembl:ENSMFAG00000001849
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See ARNT2 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
23
Annotation release Status Assembly Chr Location
102 current MFA1912RKSv2 (GCF_012559485.2) 7 NC_052261.1 (56162206..56364525)
101 previous assembly Macaca_fascicularis_5.0 (GCF_000364345.1) 7 NC_022278.1 (58897688..59100357)

Chromosome 7 - NC_052261.1Genomic Context describing neighboring genes Neighboring gene fumarylacetoacetate hydrolase Neighboring gene cortexin domain containing 1 Neighboring gene histidine-rich glycoprotein-like Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Substitution rate and structural divergence of 5'UTR evolution: comparative analysis between human and cynomolgus monkey cDNAs. Osada N, et al. Mol Biol Evol, 2005 Oct. PMID 15944441

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of aryl hydrocarbon receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aryl hydrocarbon receptor nuclear translocator 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca fascicularis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MFA1912RKSv2 Primary Assembly

Genomic

  1. NC_052261.1 Reference MFA1912RKSv2 Primary Assembly

    Range
    56162206..56364525
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005560250.3 → XP_005560307.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X1

    See identical proteins and their annotated locations for XP_005560307.1

    UniProtKB/TrEMBL
    G7P9A2
    Related
    ENSMFAP00000004296.1
    Conserved Domains (3) summary
    cd18947
    Location:62 → 124
    bHLH-PAS_ARNT; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator (ARNT) and similar proteins
    pfam00989
    Location:137 → 243
    PAS; PAS fold
    pfam14598
    Location:336 → 436
    PAS_11; PAS domain

  2. XM_005560255.3 → XP_005560312.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X4

    See identical proteins and their annotated locations for XP_005560312.1

    UniProtKB/TrEMBL
    A0A7N9CB60, Q4R3X3
    Related
    ENSMFAP00000004311.1
    Conserved Domains (3) summary
    pfam14598
    Location:336 → 436
    PAS_11; PAS domain
    pfam00010
    Location:65 → 117
    HLH; Helix-loop-helix DNA-binding domain
    pfam00989
    Location:137 → 243
    PAS; PAS fold

  3. XM_045395892.1 → XP_045251827.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X5

  4. XM_005560253.3 → XP_005560310.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X3

    See identical proteins and their annotated locations for XP_005560310.1

    UniProtKB/TrEMBL
    A0A2K5TW44, G7P9A2
    Related
    ENSMFAP00000004298.1
    Conserved Domains (3) summary
    cd18947
    Location:51 → 113
    bHLH-PAS_ARNT; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator (ARNT) and similar proteins
    pfam00989
    Location:126 → 232
    PAS; PAS fold
    pfam14598
    Location:325 → 425
    PAS_11; PAS domain

  5. XM_005560251.3 → XP_005560308.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X2

    See identical proteins and their annotated locations for XP_005560308.1

    UniProtKB/TrEMBL
    G7P9A2
    Conserved Domains (3) summary
    pfam14598
    Location:328 → 428
    PAS_11; PAS domain
    pfam00010
    Location:57 → 109
    HLH; Helix-loop-helix DNA-binding domain
    pfam00989
    Location:129 → 235
    PAS; PAS fold

  6. XM_005560252.3 → XP_005560309.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X3

    See identical proteins and their annotated locations for XP_005560309.1

    UniProtKB/TrEMBL
    A0A2K5TW44, G7P9A2
    Conserved Domains (3) summary
    cd18947
    Location:51 → 113
    bHLH-PAS_ARNT; basic helix-loop-helix-Per-ARNT-Sim (bHLH-PAS) domain found in aryl hydrocarbon receptor nuclear translocator (ARNT) and similar proteins
    pfam00989
    Location:126 → 232
    PAS; PAS fold
    pfam14598
    Location:325 → 425
    PAS_11; PAS domain
Nucleotide Protein
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