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Arhgap21 Rho GTPase activating protein 21 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101837190, updated on 8-Mar-2024

Summary

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Gene symbol
Arhgap21
Gene description
Rho GTPase activating protein 21
See related
EnsemblRapid:ENSMAUG00000003592
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429196.1 (13307754..13424659)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801738.1 (1756915..1873159)

NW_024429196.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110343273 Neighboring gene uncharacterized LOC121143498 Neighboring gene KIAA1217 ortholog Neighboring gene uncharacterized LOC121143499 Neighboring gene uncharacterized LOC121143500

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rho GTPase-activating protein 21

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429196.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    13307754..13424659
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013122517.3 → XP_012977971.1  rho GTPase-activating protein 21 isoform X3

    See identical proteins and their annotated locations for XP_012977971.1

    UniProtKB/TrEMBL
    A0A1U8CQC1
    Conserved Domains (4) summary
    cd00992
    Location:54 → 161
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd04395
    Location:1149 → 1344
    RhoGAP_ARHGAP21; RhoGAP_ARHGAP21: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP21-like proteins. ArhGAP21 is a multi-domain protein, containing RhoGAP, PH and PDZ domains, and is believed to play a role in the organization of the ...
    cd01253
    Location:937 → 1046
    PH_ARHGAP21-like; ARHGAP21 and related proteins pleckstrin homology (PH) domain
    pfam00169
    Location:938 → 1043
    PH; PH domain

  2. XM_021234456.2 → XP_021090115.1  rho GTPase-activating protein 21 isoform X4

    UniProtKB/TrEMBL
    A0A3Q0D753
    Related
    ENSMAUP00000051557.1, ENSMAUT00000075502.1
    Conserved Domains (4) summary
    cd00992
    Location:54 → 161
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd04395
    Location:1148 → 1343
    RhoGAP_ARHGAP21; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP21-like proteins. ArhGAP21 is a multi-domain protein, containing RhoGAP, PH and PDZ domains, and is believed to play a role in the organization of the cell-cell junction ...
    cd01253
    Location:937 → 1046
    PH_ARHGAP21-like; ARHGAP21 and related proteins pleckstrin homology (PH) domain
    cl26464
    Location:578 → 858
    Atrophin-1; Atrophin-1 family

  3. XM_005082694.4 → XP_005082751.1  rho GTPase-activating protein 21 isoform X7

    UniProtKB/TrEMBL
    A0A1U7QWX6
    Related
    ENSMAUP00000033296.1, ENSMAUT00000072825.1
    Conserved Domains (4) summary
    cd00992
    Location:54 → 161
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd04395
    Location:1138 → 1333
    RhoGAP_ARHGAP21; RhoGAP_ARHGAP21: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP21-like proteins. ArhGAP21 is a multi-domain protein, containing RhoGAP, PH and PDZ domains, and is believed to play a role in the organization of the ...
    cd01253
    Location:927 → 1036
    PH_ARHGAP21-like; ARHGAP21 and related proteins pleckstrin homology (PH) domain
    pfam00169
    Location:928 → 1033
    PH; PH domain

  4. XM_013122518.3 → XP_012977972.1  rho GTPase-activating protein 21 isoform X3

    See identical proteins and their annotated locations for XP_012977972.1

    UniProtKB/TrEMBL
    A0A1U8CQC1
    Related
    ENSMAUP00000003370.2, ENSMAUT00000004622.2
    Conserved Domains (4) summary
    cd00992
    Location:54 → 161
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd04395
    Location:1149 → 1344
    RhoGAP_ARHGAP21; RhoGAP_ARHGAP21: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP21-like proteins. ArhGAP21 is a multi-domain protein, containing RhoGAP, PH and PDZ domains, and is believed to play a role in the organization of the ...
    cd01253
    Location:937 → 1046
    PH_ARHGAP21-like; ARHGAP21 and related proteins pleckstrin homology (PH) domain
    pfam00169
    Location:938 → 1043
    PH; PH domain

  5. XM_013122519.3 → XP_012977973.1  rho GTPase-activating protein 21 isoform X3

    See identical proteins and their annotated locations for XP_012977973.1

    UniProtKB/TrEMBL
    A0A1U8CQC1
    Conserved Domains (4) summary
    cd00992
    Location:54 → 161
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd04395
    Location:1149 → 1344
    RhoGAP_ARHGAP21; RhoGAP_ARHGAP21: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP21-like proteins. ArhGAP21 is a multi-domain protein, containing RhoGAP, PH and PDZ domains, and is believed to play a role in the organization of the ...
    cd01253
    Location:937 → 1046
    PH_ARHGAP21-like; ARHGAP21 and related proteins pleckstrin homology (PH) domain
    pfam00169
    Location:938 → 1043
    PH; PH domain

  6. XM_013122515.3 → XP_012977969.1  rho GTPase-activating protein 21 isoform X1

    UniProtKB/TrEMBL
    A0A1U8CRC3
    Conserved Domains (4) summary
    cd00992
    Location:55 → 162
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd04395
    Location:1150 → 1345
    RhoGAP_ARHGAP21; RhoGAP_ARHGAP21: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP21-like proteins. ArhGAP21 is a multi-domain protein, containing RhoGAP, PH and PDZ domains, and is believed to play a role in the organization of the ...
    cd01253
    Location:938 → 1047
    PH_ARHGAP21-like; ARHGAP21 and related proteins pleckstrin homology (PH) domain
    pfam00169
    Location:939 → 1044
    PH; PH domain

  7. XM_013122520.3 → XP_012977974.1  rho GTPase-activating protein 21 isoform X5

    UniProtKB/TrEMBL
    A0A1U8CRC6
    Conserved Domains (4) summary
    cd00992
    Location:55 → 162
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd04395
    Location:1140 → 1335
    RhoGAP_ARHGAP21; RhoGAP_ARHGAP21: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP21-like proteins. ArhGAP21 is a multi-domain protein, containing RhoGAP, PH and PDZ domains, and is believed to play a role in the organization of the ...
    cd01253
    Location:928 → 1037
    PH_ARHGAP21-like; ARHGAP21 and related proteins pleckstrin homology (PH) domain
    pfam00169
    Location:929 → 1034
    PH; PH domain

  8. XM_013122516.3 → XP_012977970.1  rho GTPase-activating protein 21 isoform X2

    UniProtKB/TrEMBL
    A0A1U8CHM3
    Related
    ENSMAUP00000003386.2, ENSMAUT00000004646.2
    Conserved Domains (4) summary
    cd00992
    Location:55 → 162
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd04395
    Location:1149 → 1344
    RhoGAP_ARHGAP21; RhoGAP_ARHGAP21: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP21-like proteins. ArhGAP21 is a multi-domain protein, containing RhoGAP, PH and PDZ domains, and is believed to play a role in the organization of the ...
    cd01253
    Location:938 → 1047
    PH_ARHGAP21-like; ARHGAP21 and related proteins pleckstrin homology (PH) domain
    pfam00169
    Location:939 → 1044
    PH; PH domain

  9. XM_040755407.1 → XP_040611341.1  rho GTPase-activating protein 21 isoform X6

    Conserved Domains (4) summary
    PHA03247
    Location:569 → 849
    PHA03247; large tegument protein UL36; Provisional
    cd00992
    Location:55 → 162
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd04395
    Location:1139 → 1334
    RhoGAP_ARHGAP21; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP21-like proteins. ArhGAP21 is a multi-domain protein, containing RhoGAP, PH and PDZ domains, and is believed to play a role in the organization of the cell-cell junction ...
    cd01253
    Location:928 → 1037
    PH_ARHGAP21-like; ARHGAP21 and related proteins pleckstrin homology (PH) domain
Nucleotide Protein
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