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Tp53 tumor protein p53 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101833915, updated on 8-Mar-2024
Gene symbol
Tp53
Gene description
tumor protein p53
See related
EnsemblRapid:ENSMAUG00000022241
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Also known as
p53
Orthologs
all
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See Tp53 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429191.1 (48447627..48459485)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801614.1 (7557280..7569224, complement)

NW_024429191.1Genomic Context describing neighboring genes Neighboring gene ephrin B3 Neighboring gene WD repeat containing antisense to TP53 Neighboring gene ATPase Na+/K+ transporting subunit beta 2 Neighboring gene sex hormone binding globulin

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. The cDNA cloning and immunological characterization of hamster p53. Legros Y, et al. Gene, 1992 Mar 15. PMID 1555773
  2. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein tetramerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
cellular tumor antigen p53
Names
Tumor suppressor p53
p53 tumor suppressor
tumor suppressing protein
tumor supressor protein

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001281661.1 → NP_001268590.1  cellular tumor antigen p53

    See identical proteins and their annotated locations for NP_001268590.1

    Status: PROVISIONAL

    Source sequence(s)
    U07182
    UniProtKB/Swiss-Prot
    P97276, Q00366
    UniProtKB/TrEMBL
    A0A1U7Q2G4
    Related
    ENSMAUP00000026937.1, ENSMAUT00000065557.1
    Conserved Domains (3) summary
    pfam00870
    Location:98 → 292
    P53; P53 DNA-binding domain
    pfam07710
    Location:322 → 358
    P53_tetramer; P53 tetramerization motif
    pfam08563
    Location:5 → 27
    P53_TAD; P53 transactivation motif

RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429191.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    48447627..48459485
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q00366.1 GenPept UniProtKB/Swiss-Prot:Q00366

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases