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KAT2B lysine acetyltransferase 2B [ Ficedula albicollis (Collared flycatcher) ]

Gene ID: 101820857, updated on 8-Mar-2024

Summary

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Gene symbol
KAT2B
Gene description
lysine acetyltransferase 2B
See related
Ensembl:ENSFALG00000009224
Gene type
protein coding
RefSeq status
MODEL
Organism
Ficedula albicollis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
18
Annotation release Status Assembly Chr Location
101 current FicAlb1.5 (GCF_000247815.1) 2 NC_021673.1 (38169675..38208411)

Chromosome 2 - NC_021673.1Genomic Context describing neighboring genes Neighboring gene EF-hand domain family member B Neighboring gene RAB5A, member RAS oncogene family Neighboring gene protein phosphatase 2C like domain containing 1 Neighboring gene shugoshin 1 Neighboring gene zinc finger protein 385D

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_021673.1 Chromosome 2 Reference FicAlb1.5 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H3 acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone acetyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone acetyltransferase KAT2B
Names
K(lysine) acetyltransferase 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ficedula albicollis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference FicAlb1.5 Primary Assembly

Genomic

  1. NC_021673.1 Reference FicAlb1.5 Primary Assembly

    Range
    38169675..38208411
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005041125.1 → XP_005041182.1  histone acetyltransferase KAT2B

    UniProtKB/TrEMBL
    A0A803VMJ4
    Related
    ENSFALP00000023950.1, ENSFALT00000034143.1
    Conserved Domains (4) summary
    cd05509
    Location:724 → 823
    Bromo_gcn5_like; Bromodomain; Gcn5_like subfamily. Gcn5p is a histone acetyltransferase (HAT) which mediates acetylation of histones at lysine residues; such acetylation is generally correlated with the activation of transcription. Bromodomains are 110 amino acid long ...
    COG5076
    Location:484 → 817
    COG5076; Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin structure and dynamics / Transcription]
    pfam00583
    Location:547 → 619
    Acetyltransf_1; Acetyltransferase (GNAT) family
    pfam06466
    Location:102 → 322
    PCAF_N; PCAF (P300/CBP-associated factor) N-terminal domain
Nucleotide Protein
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