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LOC101768441 ethylene-responsive transcription factor ERF109 [ Setaria italica (foxtail millet) ]

Gene ID: 101768441, updated on 21-Dec-2023

Summary

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Gene symbol
LOC101768441
Gene description
ethylene-responsive transcription factor ERF109
Locus tag
SETIT_014237mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Setaria italica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Genomic context

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Location:
chromosome: VI
Exon count:
1
Annotation release Status Assembly Chr Location
103 current Setaria_italica_v2.0 (GCF_000263155.2) VI NC_028455.1 (30657618..30658924)
101 previous assembly Setaria V1 (GCF_000263155.1) Unplaced Scaffold NW_004675966.1 (30658347..30659358)

Chromosome VI - NC_028455.1Genomic Context describing neighboring genes Neighboring gene alpha-amylase isozyme 3D Neighboring gene alpha-amylase isozyme 3D Neighboring gene uncharacterized LOC101768841 Neighboring gene uncharacterized LOC101778057

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ethylene-activated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ethylene-responsive transcription factor ERF109

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Setaria italica Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Setaria_italica_v2.0 Primary Assembly

Genomic

  1. NC_028455.1 Reference Setaria_italica_v2.0 Primary Assembly

    Range
    30657618..30658924
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004973616.3 → XP_004973673.1  ethylene-responsive transcription factor ERF109

    UniProtKB/TrEMBL
    K3YJ18
    Conserved Domains (1) summary
    smart00380
    Location:142 → 196
    AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Nucleotide Protein Strain
Heading Accession and Version

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