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STAG3L5P stromal antigen 3-like 5 pseudogene [ Homo sapiens (human) ]

Gene ID: 101735302, updated on 23-Nov-2021

Summary

Official Symbol
STAG3L5Pprovided by HGNC
Official Full Name
stromal antigen 3-like 5 pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:48896
See related
Ensembl:ENSG00000242294
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in testis (RPKM 25.5), spleen (RPKM 14.0) and 25 other tissues See more
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Genomic context

See STAG3L5P in Genome Data Viewer
Location:
7q22.1
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 7 NC_000007.14 (100336079..100341328)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (99933702..99938951)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene CASTOR family member 3 Neighboring gene uncharacterized LOC105375426 Neighboring gene STAG3L5P-PVRIG2P-PILRB readthrough Neighboring gene speedy/RINGO cell cycle regulator family member E3 Neighboring gene PMS1 homolog 2, mismatch repair system component pseudogene 1 Neighboring gene poliovirus receptor related immunoglobulin domain containing 2, pseudogene Neighboring gene microRNA 6840

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_103720.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BM826568, DA306290
    Related
    ENST00000422479.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p13 Primary Assembly

    Range
    100336079..100341328
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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