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L3hypdh trans-L-3-hydroxyproline dehydratase [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101725460, updated on 8-Mar-2024

Summary

Gene symbol
L3hypdh
Gene description
trans-L-3-hydroxyproline dehydratase
Locus tag
GW7_03416
See related
Ensembl:ENSHGLG00000014479
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
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Genomic context

See L3hypdh in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624734.1 (41625899..41636907)

NW_004624734.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 175 Neighboring gene JNK1/MAPK8 associated membrane protein Neighboring gene G protein-coupled receptor 135 Neighboring gene dishevelled associated activator of morphogenesis 1

Genomic regions, transcripts, and products

Genomic Sequence:
NW_004624734 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

General protein information

Preferred Names
trans-3-hydroxy-L-proline dehydratase
Names
Putative proline racemase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624734.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    41625899..41636907
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004837459.2XP_004837516.1  trans-3-hydroxy-L-proline dehydratase isoform X1

    See identical proteins and their annotated locations for XP_004837516.1

    UniProtKB/TrEMBL
    G5B7F0
    Related
    ENSHGLP00000020242.1, ENSHGLT00000020443.1
    Conserved Domains (2) summary
    PRK13970
    Location:20347
    PRK13970; hydroxyproline-2-epimerase; Provisional
    pfam05544
    Location:22352
    Pro_racemase; Proline racemase
  2. XM_004837460.2XP_004837517.1  trans-3-hydroxy-L-proline dehydratase isoform X2

    Conserved Domains (2) summary
    PRK13970
    Location:20336
    PRK13970; hydroxyproline-2-epimerase; Provisional
    pfam05544
    Location:22334
    Pro_racemase; Proline racemase
  3. XM_021248084.1XP_021103743.1  trans-3-hydroxy-L-proline dehydratase isoform X3

    Conserved Domains (1) summary
    cl27019
    Location:1181
    Pro_racemase; Proline racemase