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Arpc1a actin related protein 2/3 complex subunit 1A [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101724607, updated on 1-Mar-2025
Gene symbol
Arpc1a
Gene description
actin related protein 2/3 complex subunit 1A
See related
Ensembl:ENSHGLG00000017246 RGD:18919581
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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See Arpc1a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624740.1 (32771870..32801047)

NW_004624740.1Genomic Context describing neighboring genes Neighboring gene karyopherin subunit alpha 7 Neighboring gene myosin-16-like Neighboring gene DNA damage-regulated autophagy modulator protein 2 pseudogene Neighboring gene actin related protein 2/3 complex subunit 1B Neighboring gene pentatricopeptide repeat-containing protein 1, mitochondrial Neighboring gene PDGFA associated protein 1 Neighboring gene BUD31 homolog

Genomic Sequence:
NW_004624740 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Arp2/3 complex-mediated actin nucleation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Arp2/3 protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
actin-related protein 2/3 complex subunit 1A

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624740.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    32771870..32801047
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004840496.3 → XP_004840553.1  actin-related protein 2/3 complex subunit 1A isoform X3

    UniProtKB/TrEMBL
    A0A0P6IZ98, G5BP88
    Related
    ENSHGLP00000024198.1, ENSHGLT00000024417.1
    Conserved Domains (3) summary
    COG2319
    Location:9 → 171
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:11 → 50
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:46 → 234
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_021254796.1 → XP_021110455.1  actin-related protein 2/3 complex subunit 1A isoform X1

    UniProtKB/TrEMBL
    A0AAX6SRC1
    Conserved Domains (2) summary
    sd00039
    Location:11 → 50
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:46 → 234
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_021254797.1 → XP_021110456.1  actin-related protein 2/3 complex subunit 1A isoform X2

    UniProtKB/TrEMBL
    A0AAX6SLY7
    Conserved Domains (2) summary
    sd00039
    Location:11 → 50
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:46 → 234
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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