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Gtf2ird1 GTF2I repeat domain containing 1 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101724499, updated on 1-Mar-2025
Gene symbol
Gtf2ird1
Gene description
GTF2I repeat domain containing 1
See related
Ensembl:ENSHGLG00000017547 RGD:18903497
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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Location:
chromosome: Un
Exon count:
29
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624740.1 (13581752..13653148, complement)

NW_004624740.1Genomic Context describing neighboring genes Neighboring gene general transcription factor IIi Neighboring gene centrosomal protein of 57 kDa pseudogene Neighboring gene uncharacterized LOC110348163 Neighboring gene CAP-Gly domain containing linker protein 2 Neighboring gene translation initiation factor IF-2-like

Genomic Sequence:
NW_004624740 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
general transcription factor II-I repeat domain-containing protein 1

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624740.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    13581752..13653148 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013070483.1 → XP_012925937.1  general transcription factor II-I repeat domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_012925937.1

    UniProtKB/TrEMBL
    A0AAX6QTV7, G5C6A9
    Conserved Domains (1) summary
    pfam02946
    Location:796 → 868
    GTF2I; GTF2I-like repeat

  2. XM_013070486.2 → XP_012925940.1  general transcription factor II-I repeat domain-containing protein 1 isoform X5

    UniProtKB/TrEMBL
    A0AAX6QTJ6, G5C6A9
    Related
    ENSHGLP00000024611.1, ENSHGLT00000024833.1
    Conserved Domains (1) summary
    pfam02946
    Location:566 → 638
    GTF2I; GTF2I-like repeat

  3. XM_004840025.3 → XP_004840082.2  general transcription factor II-I repeat domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0AAX6NZ55, G5C6A9
    Related
    ENSHGLP00000024610.1, ENSHGLT00000024832.1
    Conserved Domains (1) summary
    pfam02946
    Location:566 → 638
    GTF2I; GTF2I-like repeat

  4. XM_013070485.2 → XP_012925939.1  general transcription factor II-I repeat domain-containing protein 1 isoform X4

    UniProtKB/TrEMBL
    A0AAX6QSZ8, G5C6A9
    Conserved Domains (1) summary
    pfam02946
    Location:777 → 849
    GTF2I; GTF2I-like repeat

  5. XM_013070484.2 → XP_012925938.1  general transcription factor II-I repeat domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0AAX6QSS4, G5C6A9
    Conserved Domains (1) summary
    pfam02946
    Location:796 → 868
    GTF2I; GTF2I-like repeat

  6. XM_013070481.2 → XP_012925935.1  general transcription factor II-I repeat domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_012925935.1

    UniProtKB/TrEMBL
    A0AAX6QTV7, G5C6A9
    Conserved Domains (1) summary
    pfam02946
    Location:796 → 868
    GTF2I; GTF2I-like repeat

  7. XM_013070482.2 → XP_012925936.1  general transcription factor II-I repeat domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_012925936.1

    UniProtKB/TrEMBL
    A0AAX6QTV7, G5C6A9
    Conserved Domains (1) summary
    pfam02946
    Location:796 → 868
    GTF2I; GTF2I-like repeat
Nucleotide Protein
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