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Pals1 protein associated with LIN7 1, MAGUK p55 family member [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101724481, updated on 1-Mar-2025
Gene symbol
Pals1
Gene description
protein associated with LIN7 1, MAGUK p55 family member
Locus tag
GW7_03716
See related
Ensembl:ENSHGLG00000012768 RGD:18907969
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Also known as
Mpp5
Orthologs
human mouse all
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See Pals1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624734.1 (33659625..33758680, complement)

NW_004624734.1Genomic Context describing neighboring genes Neighboring gene pleckstrin 2 Neighboring gene eukaryotic translation initiation factor 2 subunit 3, X-linked pseudogene Neighboring gene eukaryotic translation initiation factor 2 subunit alpha Neighboring gene ATPase H+ transporting V1 subunit D Neighboring gene golgi associated RAB2 interactor family member 2 Neighboring gene gephyrin Neighboring gene axin interactor, dorsalization-associated protein pseudogene

Genomic Sequence:
NW_004624734 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in establishment or maintenance of epithelial cell apical/basal polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment or maintenance of polarity of embryonic epithelium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in generation of neurons IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in morphogenesis of an epithelial sheet IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
MAGUK p55 subfamily member 5
Names
membrane palmitoylated protein 5
protein associated with LIN7 1, MAGUK family member

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624734.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    33659625..33758680 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021247516.1 → XP_021103175.1  MAGUK p55 subfamily member 5 isoform X1

    UniProtKB/TrEMBL
    A0A0P6JMB9, G5C7Y4
    Conserved Domains (5) summary
    smart00569
    Location:189 → 238
    L27; domain in receptor targeting proteins Lin-2 and Lin-7
    cd12036
    Location:349 → 411
    SH3_MPP5; Src Homology 3 domain of Membrane Protein, Palmitoylated 5 (or MAGUK p55 subfamily member 5)
    smart00072
    Location:491 → 661
    GuKc; Guanylate kinase homologues
    cd00992
    Location:254 → 333
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09060
    Location:123 → 170
    L27_N; L27_N

  2. XM_004837371.2 → XP_004837428.1  MAGUK p55 subfamily member 5 isoform X1

    See identical proteins and their annotated locations for XP_004837428.1

    UniProtKB/TrEMBL
    A0A0P6JMB9, G5C7Y4
    Conserved Domains (5) summary
    smart00569
    Location:189 → 238
    L27; domain in receptor targeting proteins Lin-2 and Lin-7
    cd12036
    Location:349 → 411
    SH3_MPP5; Src Homology 3 domain of Membrane Protein, Palmitoylated 5 (or MAGUK p55 subfamily member 5)
    smart00072
    Location:491 → 661
    GuKc; Guanylate kinase homologues
    cd00992
    Location:254 → 333
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09060
    Location:123 → 170
    L27_N; L27_N

  3. XM_021247511.1 → XP_021103170.1  MAGUK p55 subfamily member 5 isoform X1

    UniProtKB/TrEMBL
    A0A0P6JMB9, G5C7Y4
    Conserved Domains (5) summary
    smart00569
    Location:189 → 238
    L27; domain in receptor targeting proteins Lin-2 and Lin-7
    cd12036
    Location:349 → 411
    SH3_MPP5; Src Homology 3 domain of Membrane Protein, Palmitoylated 5 (or MAGUK p55 subfamily member 5)
    smart00072
    Location:491 → 661
    GuKc; Guanylate kinase homologues
    cd00992
    Location:254 → 333
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09060
    Location:123 → 170
    L27_N; L27_N

  4. XM_013067627.2 → XP_012923081.1  MAGUK p55 subfamily member 5 isoform X2

    See identical proteins and their annotated locations for XP_012923081.1

    UniProtKB/TrEMBL
    A0A0P6JMB9, A0AAX6NUZ3
    Conserved Domains (6) summary
    smart00569
    Location:155 → 204
    L27; domain in receptor targeting proteins Lin-2 and Lin-7
    cd12036
    Location:315 → 377
    SH3_MPP5; Src Homology 3 domain of Membrane Protein, Palmitoylated 5 (or MAGUK p55 subfamily member 5)
    smart00072
    Location:457 → 627
    GuKc; Guanylate kinase homologues
    cd00992
    Location:220 → 299
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam00625
    Location:444 → 628
    Guanylate_kin; Guanylate kinase
    pfam09060
    Location:89 → 136
    L27_N; L27_N

  5. XM_004837373.2 → XP_004837430.1  MAGUK p55 subfamily member 5 isoform X2

    See identical proteins and their annotated locations for XP_004837430.1

    UniProtKB/TrEMBL
    A0A0P6JMB9, A0AAX6NUZ3
    Conserved Domains (6) summary
    smart00569
    Location:155 → 204
    L27; domain in receptor targeting proteins Lin-2 and Lin-7
    cd12036
    Location:315 → 377
    SH3_MPP5; Src Homology 3 domain of Membrane Protein, Palmitoylated 5 (or MAGUK p55 subfamily member 5)
    smart00072
    Location:457 → 627
    GuKc; Guanylate kinase homologues
    cd00992
    Location:220 → 299
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam00625
    Location:444 → 628
    Guanylate_kin; Guanylate kinase
    pfam09060
    Location:89 → 136
    L27_N; L27_N

  6. XM_004837372.2 → XP_004837429.1  MAGUK p55 subfamily member 5 isoform X2

    See identical proteins and their annotated locations for XP_004837429.1

    UniProtKB/TrEMBL
    A0A0P6JMB9, A0AAX6NUZ3
    Conserved Domains (6) summary
    smart00569
    Location:155 → 204
    L27; domain in receptor targeting proteins Lin-2 and Lin-7
    cd12036
    Location:315 → 377
    SH3_MPP5; Src Homology 3 domain of Membrane Protein, Palmitoylated 5 (or MAGUK p55 subfamily member 5)
    smart00072
    Location:457 → 627
    GuKc; Guanylate kinase homologues
    cd00992
    Location:220 → 299
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam00625
    Location:444 → 628
    Guanylate_kin; Guanylate kinase
    pfam09060
    Location:89 → 136
    L27_N; L27_N

  7. XM_021247513.1 → XP_021103172.1  MAGUK p55 subfamily member 5 isoform X1

    UniProtKB/TrEMBL
    A0A0P6JMB9, G5C7Y4
    Related
    ENSHGLP00000017832.1, ENSHGLT00000018009.1
    Conserved Domains (5) summary
    smart00569
    Location:189 → 238
    L27; domain in receptor targeting proteins Lin-2 and Lin-7
    cd12036
    Location:349 → 411
    SH3_MPP5; Src Homology 3 domain of Membrane Protein, Palmitoylated 5 (or MAGUK p55 subfamily member 5)
    smart00072
    Location:491 → 661
    GuKc; Guanylate kinase homologues
    cd00992
    Location:254 → 333
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09060
    Location:123 → 170
    L27_N; L27_N
Nucleotide Protein
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