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Pals1 protein associated with LIN7 1, MAGUK p55 family member [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101724481, updated on 8-Mar-2024

Summary

Gene symbol
Pals1
Gene description
protein associated with LIN7 1, MAGUK p55 family member
Locus tag
GW7_03716
See related
Ensembl:ENSHGLG00000012768
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Also known as
Mpp5
Orthologs
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Genomic context

See Pals1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624734.1 (33659625..33758680, complement)

NW_004624734.1Genomic Context describing neighboring genes Neighboring gene pleckstrin 2 Neighboring gene eukaryotic translation initiation factor 2 subunit 3, X-linked pseudogene Neighboring gene eukaryotic translation initiation factor 2 subunit alpha Neighboring gene ATPase H+ transporting V1 subunit D Neighboring gene golgi associated RAB2 interactor family member 2 Neighboring gene gephyrin Neighboring gene axin interactor, dorsalization-associated protein pseudogene

Genomic regions, transcripts, and products

Genomic Sequence:
NW_004624734 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

General protein information

Preferred Names
MAGUK p55 subfamily member 5
Names
membrane palmitoylated protein 5
protein associated with LIN7 1, MAGUK family member

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624734.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    33659625..33758680 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021247516.1XP_021103175.1  MAGUK p55 subfamily member 5 isoform X1

    UniProtKB/TrEMBL
    A0A0P6JMB9, G5C7Y4
    Conserved Domains (5) summary
    smart00569
    Location:189238
    L27; domain in receptor targeting proteins Lin-2 and Lin-7
    cd12036
    Location:349411
    SH3_MPP5; Src Homology 3 domain of Membrane Protein, Palmitoylated 5 (or MAGUK p55 subfamily member 5)
    smart00072
    Location:491661
    GuKc; Guanylate kinase homologues
    cd00992
    Location:254333
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09060
    Location:123170
    L27_N; L27_N
  2. XM_004837371.2XP_004837428.1  MAGUK p55 subfamily member 5 isoform X1

    See identical proteins and their annotated locations for XP_004837428.1

    UniProtKB/TrEMBL
    A0A0P6JMB9, G5C7Y4
    Conserved Domains (5) summary
    smart00569
    Location:189238
    L27; domain in receptor targeting proteins Lin-2 and Lin-7
    cd12036
    Location:349411
    SH3_MPP5; Src Homology 3 domain of Membrane Protein, Palmitoylated 5 (or MAGUK p55 subfamily member 5)
    smart00072
    Location:491661
    GuKc; Guanylate kinase homologues
    cd00992
    Location:254333
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09060
    Location:123170
    L27_N; L27_N
  3. XM_021247511.1XP_021103170.1  MAGUK p55 subfamily member 5 isoform X1

    UniProtKB/TrEMBL
    A0A0P6JMB9, G5C7Y4
    Conserved Domains (5) summary
    smart00569
    Location:189238
    L27; domain in receptor targeting proteins Lin-2 and Lin-7
    cd12036
    Location:349411
    SH3_MPP5; Src Homology 3 domain of Membrane Protein, Palmitoylated 5 (or MAGUK p55 subfamily member 5)
    smart00072
    Location:491661
    GuKc; Guanylate kinase homologues
    cd00992
    Location:254333
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09060
    Location:123170
    L27_N; L27_N
  4. XM_013067627.2XP_012923081.1  MAGUK p55 subfamily member 5 isoform X2

    See identical proteins and their annotated locations for XP_012923081.1

    UniProtKB/TrEMBL
    A0A0P6JMB9
    Conserved Domains (6) summary
    smart00569
    Location:155204
    L27; domain in receptor targeting proteins Lin-2 and Lin-7
    cd12036
    Location:315377
    SH3_MPP5; Src Homology 3 domain of Membrane Protein, Palmitoylated 5 (or MAGUK p55 subfamily member 5)
    smart00072
    Location:457627
    GuKc; Guanylate kinase homologues
    cd00992
    Location:220299
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam00625
    Location:444628
    Guanylate_kin; Guanylate kinase
    pfam09060
    Location:89136
    L27_N; L27_N
  5. XM_004837373.2XP_004837430.1  MAGUK p55 subfamily member 5 isoform X2

    See identical proteins and their annotated locations for XP_004837430.1

    UniProtKB/TrEMBL
    A0A0P6JMB9
    Conserved Domains (6) summary
    smart00569
    Location:155204
    L27; domain in receptor targeting proteins Lin-2 and Lin-7
    cd12036
    Location:315377
    SH3_MPP5; Src Homology 3 domain of Membrane Protein, Palmitoylated 5 (or MAGUK p55 subfamily member 5)
    smart00072
    Location:457627
    GuKc; Guanylate kinase homologues
    cd00992
    Location:220299
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam00625
    Location:444628
    Guanylate_kin; Guanylate kinase
    pfam09060
    Location:89136
    L27_N; L27_N
  6. XM_004837372.2XP_004837429.1  MAGUK p55 subfamily member 5 isoform X2

    See identical proteins and their annotated locations for XP_004837429.1

    UniProtKB/TrEMBL
    A0A0P6JMB9
    Conserved Domains (6) summary
    smart00569
    Location:155204
    L27; domain in receptor targeting proteins Lin-2 and Lin-7
    cd12036
    Location:315377
    SH3_MPP5; Src Homology 3 domain of Membrane Protein, Palmitoylated 5 (or MAGUK p55 subfamily member 5)
    smart00072
    Location:457627
    GuKc; Guanylate kinase homologues
    cd00992
    Location:220299
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam00625
    Location:444628
    Guanylate_kin; Guanylate kinase
    pfam09060
    Location:89136
    L27_N; L27_N
  7. XM_021247513.1XP_021103172.1  MAGUK p55 subfamily member 5 isoform X1

    UniProtKB/TrEMBL
    A0A0P6JMB9, G5C7Y4
    Related
    ENSHGLP00000017832.1, ENSHGLT00000018009.1
    Conserved Domains (5) summary
    smart00569
    Location:189238
    L27; domain in receptor targeting proteins Lin-2 and Lin-7
    cd12036
    Location:349411
    SH3_MPP5; Src Homology 3 domain of Membrane Protein, Palmitoylated 5 (or MAGUK p55 subfamily member 5)
    smart00072
    Location:491661
    GuKc; Guanylate kinase homologues
    cd00992
    Location:254333
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09060
    Location:123170
    L27_N; L27_N