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Cbfb core-binding factor subunit beta [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101723908, updated on 1-Mar-2025
Gene symbol
Cbfb
Gene description
core-binding factor subunit beta
Locus tag
GW7_12026
See related
Ensembl:ENSHGLG00000010694 RGD:18916540
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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See Cbfb in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624746.1 (19204415..19264217, complement)

NW_004624746.1Genomic Context describing neighboring genes Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 Neighboring gene phagophore assembly factor 1 Neighboring gene thioredoxin-dependent peroxide reductase, mitochondrial pseudogene Neighboring gene 40S ribosomal protein S20 pseudogene Neighboring gene carboxylesterase 4A Neighboring gene carboxylesterase 3

Genomic Sequence:
NW_004624746 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of core-binding factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
core-binding factor subunit beta
Names
core-binding factor beta subunit

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624746.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    19204415..19264217 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021256917.1 → XP_021112576.1  core-binding factor subunit beta isoform X4

    UniProtKB/TrEMBL
    A0AAX6SS96
    Conserved Domains (1) summary
    pfam02312
    Location:1 → 126
    CBF_beta; Core binding factor beta subunit

  2. XM_021256918.1 → XP_021112577.1  core-binding factor subunit beta isoform X5

    UniProtKB/TrEMBL
    A0AAX6SU21
    Related
    ENSHGLP00000014952.1, ENSHGLT00000015102.1
    Conserved Domains (1) summary
    pfam02312
    Location:1 → 126
    CBF_beta; Core binding factor beta subunit

  3. XM_021256916.1 → XP_021112575.1  core-binding factor subunit beta isoform X1

    UniProtKB/TrEMBL
    A0AAX6STR6
    Conserved Domains (1) summary
    pfam02312
    Location:1 → 165
    CBF_beta; Core binding factor beta subunit

  4. XM_004843070.3 → XP_004843127.1  core-binding factor subunit beta isoform X2

    See identical proteins and their annotated locations for XP_004843127.1

    UniProtKB/TrEMBL
    A0A0P6JF91
    Related
    ENSHGLP00000014951.1, ENSHGLT00000015101.1
    Conserved Domains (1) summary
    pfam02312
    Location:1 → 165
    CBF_beta; Core binding factor beta subunit

  5. XM_004843071.3 → XP_004843128.1  core-binding factor subunit beta isoform X3

    See identical proteins and their annotated locations for XP_004843128.1

    UniProtKB/TrEMBL
    A0AAX6P3I8
    Related
    ENSHGLP00000014950.1, ENSHGLT00000015100.1
    Conserved Domains (1) summary
    pfam02312
    Location:1 → 165
    CBF_beta; Core binding factor beta subunit
Nucleotide Protein
Heading Accession and Version

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