U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC101723550 AFG3-like protein 1 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101723550, updated on 1-Mar-2025
Gene symbol
LOC101723550
Gene description
AFG3-like protein 1
See related
Ensembl:ENSHGLG00000009159 RGD:18906089
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
NEW
Try the new Gene table
Try the new Transcript table
See LOC101723550 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624746.1 (56472..92757, complement)

NW_004624746.1Genomic Context describing neighboring genes Neighboring gene 5-hydroxyisourate hydrolase Neighboring gene growth arrest specific 8 Neighboring gene dysbindin domain containing 1 Neighboring gene differentially expressed in FDCP 8 homolog Neighboring gene tubulin beta 3 class III

Genomic Sequence:
NW_004624746 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent peptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial protein processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein-containing complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of m-AAA complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
AFG3-like protein 1

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624746.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    56472..92757 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021256511.1 → XP_021112170.1  AFG3-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0AAX6SUI3, G5APH0
    Conserved Domains (2) summary
    pfam06480
    Location:16 → 107
    FtsH_ext; FtsH Extracellular
    cl27568
    Location:120 → 614
    TIP49; TIP49 C-terminus

  2. XM_021256513.1 → XP_021112172.1  AFG3-like protein 1 isoform X4

    UniProtKB/TrEMBL
    A0AAX6SSV3
    Conserved Domains (1) summary
    cl27568
    Location:89 → 528
    TIP49; TIP49 C-terminus

  3. XM_021256510.1 → XP_021112169.1  AFG3-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0AAX6SUI3, G5APH0
    Conserved Domains (2) summary
    pfam06480
    Location:16 → 107
    FtsH_ext; FtsH Extracellular
    cl27568
    Location:120 → 614
    TIP49; TIP49 C-terminus

  4. XM_021256512.1 → XP_021112171.1  AFG3-like protein 1 isoform X3

    UniProtKB/TrEMBL
    A0AAX6SR65, G5APH0
    Conserved Domains (2) summary
    pfam06480
    Location:16 → 107
    FtsH_ext; FtsH Extracellular
    cl27568
    Location:120 → 609
    TIP49; TIP49 C-terminus

  5. XM_013071632.2 → XP_012927086.2  AFG3-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0AAX6QWT9, G5APH0
    Related
    ENSHGLP00000012806.1, ENSHGLT00000012943.1
    Conserved Domains (2) summary
    pfam06480
    Location:16 → 107
    FtsH_ext; FtsH Extracellular
    cl27568
    Location:120 → 612
    TIP49; TIP49 C-terminus
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases