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Brf1 BRF1 RNA polymerase III transcription initiation factor subunit [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101723395, updated on 8-Mar-2024

Summary

Gene symbol
Brf1
Gene description
BRF1 RNA polymerase III transcription initiation factor subunit
See related
Ensembl:ENSHGLG00000017851
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
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Genomic context

See Brf1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624734.1 (213536..280816)

NW_004624734.1Genomic Context describing neighboring genes Neighboring gene metastasis-associated protein MTA1 Neighboring gene uncharacterized LOC110345581 Neighboring gene phosphofurin acidic cluster sorting protein 2 Neighboring gene proteasome subunit alpha type-6-like Neighboring gene BTB domain containing 6 Neighboring gene nudix hydrolase 14 Neighboring gene jagged canonical Notch ligand 2

Genomic regions, transcripts, and products

Genomic Sequence:
NW_004624734 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

General protein information

Preferred Names
transcription factor IIIB 90 kDa subunit
Names
BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624734.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    213536..280816
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021243387.1XP_021099046.1  transcription factor IIIB 90 kDa subunit isoform X2

    UniProtKB/TrEMBL
    G5AWJ7
    Conserved Domains (2) summary
    COG1405
    Location:4266
    SUA7; Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
    pfam07741
    Location:449547
    BRF1; Brf1-like TBP-binding domain
  2. XM_021243390.1XP_021099049.1  transcription factor IIIB 90 kDa subunit isoform X3

    UniProtKB/TrEMBL
    G5AWJ7
    Conserved Domains (2) summary
    COG1405
    Location:4239
    SUA7; Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
    pfam07741
    Location:423521
    BRF1; Brf1-like TBP-binding domain
  3. XM_004836828.2XP_004836885.1  transcription factor IIIB 90 kDa subunit isoform X1

    UniProtKB/TrEMBL
    G5AWJ7
    Related
    ENSHGLP00000025052.1, ENSHGLT00000025274.1
    Conserved Domains (4) summary
    COG1405
    Location:4266
    SUA7; Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
    pfam07741
    Location:454546
    BRF1; Brf1-like TBP-binding domain
    pfam08271
    Location:443
    TF_Zn_Ribbon; TFIIB zinc-binding
    cl00050
    Location:187260
    CYCLIN; Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control. Present in cyclins, TFIIB and Retinoblastoma (RB).The cyclins consist of 8 classes of cell cycle regulators that regulate cyclin dependent kinases (CDKs). TFIIB ...
  4. XM_013066121.2XP_012921575.1  transcription factor IIIB 90 kDa subunit isoform X4

    UniProtKB/TrEMBL
    G5AWJ7
    Conserved Domains (3) summary
    COG1405
    Location:1151
    SUA7; Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription]
    pfam07741
    Location:339431
    BRF1; Brf1-like TBP-binding domain
    cl00050
    Location:72145
    CYCLIN; Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control. Present in cyclins, TFIIB and Retinoblastoma (RB).The cyclins consist of 8 classes of cell cycle regulators that regulate cyclin dependent kinases (CDKs). TFIIB ...
  5. XM_004836830.2XP_004836887.1  transcription factor IIIB 90 kDa subunit isoform X5

    Conserved Domains (2) summary
    pfam07741
    Location:250342
    BRF1; Brf1-like TBP-binding domain
    cl00050
    Location:356
    CYCLIN; Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control. Present in cyclins, TFIIB and Retinoblastoma (RB).The cyclins consist of 8 classes of cell cycle regulators that regulate cyclin dependent kinases (CDKs). TFIIB ...
  6. XM_004836831.3XP_004836888.1  transcription factor IIIB 90 kDa subunit isoform X6

    Conserved Domains (1) summary
    pfam07741
    Location:247339
    BRF1; Brf1-like TBP-binding domain