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Sema4f ssemaphorin 4F [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101722750, updated on 1-Mar-2025
Gene symbol
Sema4f
Gene description
ssemaphorin 4F
See related
Ensembl:ENSHGLG00000009042 RGD:18932084
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
all
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Try the new Transcripts and proteins table
See Sema4f in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624749.1 (28827766..28855159, complement)

NW_004624749.1Genomic Context describing neighboring genes Neighboring gene T-box transcription factor TBX22-like Neighboring gene hexokinase 2 Neighboring gene uncharacterized LOC110349102 Neighboring gene UPF0690 protein C1orf52 pseudogene Neighboring gene meiosis 1 associated protein Neighboring gene cytochrome c-like Neighboring gene docking protein 1

Genomic Sequence:
NW_004624749 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemorepellent activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables semaphorin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of axon extension involved in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neural crest cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in semaphorin-plexin signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
semaphorin-4F

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624749.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    28827766..28855159 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021258256.1 → XP_021113915.1  semaphorin-4F isoform X4

    UniProtKB/TrEMBL
    A0AAX6SZL7, G5AXE2
    Conserved Domains (3) summary
    pfam01437
    Location:377 → 428
    PSI; Plexin repeat
    cl11960
    Location:435 → 513
    Ig; Immunoglobulin domain
    cl15693
    Location:1 → 375
    Sema; The Sema domain, a protein interacting module, of semaphorins and plexins

  2. XM_004844656.2 → XP_004844713.1  semaphorin-4F isoform X3

    UniProtKB/TrEMBL
    A0AAX6SZ93, G5AXE2
    Conserved Domains (3) summary
    pfam01437
    Location:410 → 461
    PSI; Plexin repeat
    cl11960
    Location:468 → 546
    Ig; Immunoglobulin domain
    cl15693
    Location:1 → 408
    Sema; The Sema domain, a protein interacting module, of semaphorins and plexins

  3. XM_004844655.2 → XP_004844712.1  semaphorin-4F isoform X2

    UniProtKB/TrEMBL
    A0AAX6P6V2, G5AXE2
    Conserved Domains (3) summary
    pfam01437
    Location:479 → 530
    PSI; Plexin repeat
    cl11960
    Location:537 → 615
    Ig; Immunoglobulin domain
    cl15693
    Location:53 → 477
    Sema; The Sema domain, a protein interacting module, of semaphorins and plexins

  4. XM_004844654.2 → XP_004844711.1  semaphorin-4F isoform X1

    UniProtKB/TrEMBL
    A0A0P6J5C0, G5AXE2
    Related
    ENSHGLP00000012652.1, ENSHGLT00000012789.1
    Conserved Domains (3) summary
    cd11261
    Location:53 → 510
    Sema_4F; The Sema domain, a protein interacting module, of semaphorin 4F (Sema4F)
    pfam01437
    Location:512 → 563
    PSI; Plexin repeat
    cl11960
    Location:570 → 648
    Ig; Immunoglobulin domain

  5. XM_021258255.1 → XP_021113914.1  semaphorin-4F isoform X3

    UniProtKB/TrEMBL
    A0AAX6SZ93, G5AXE2
    Conserved Domains (3) summary
    pfam01437
    Location:410 → 461
    PSI; Plexin repeat
    cl11960
    Location:468 → 546
    Ig; Immunoglobulin domain
    cl15693
    Location:1 → 408
    Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
Nucleotide Protein
Heading Accession and Version

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