U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Gtf2i general transcription factor IIi [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101722019, updated on 1-Mar-2025
Gene symbol
Gtf2i
Gene description
general transcription factor IIi
See related
Ensembl:ENSHGLG00000006657 RGD:18910452
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table
See Gtf2i in Genome Data Viewer
Location:
chromosome: Un
Exon count:
36
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624740.1 (13446811..13547050, complement)

NW_004624740.1Genomic Context describing neighboring genes Neighboring gene general transcription factor II-I repeat domain-containing protein 2B Neighboring gene uncharacterized LOC106008999 Neighboring gene neutrophil cytosolic factor 1 Neighboring gene centrosomal protein of 57 kDa pseudogene Neighboring gene GTF2I repeat domain containing 1

Genomic Sequence:
NW_004624740 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
general transcription factor II-I

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624740.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    13446811..13547050 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004840023.3 → XP_004840080.1  general transcription factor II-I isoform X9

    See identical proteins and their annotated locations for XP_004840080.1

    UniProtKB/TrEMBL
    A0AAX6NZ18, G5C6B0
    Related
    ENSHGLP00000009277.1, ENSHGLT00000009377.1
    Conserved Domains (1) summary
    pfam02946
    Location:112 → 184
    GTF2I; GTF2I-like repeat

  2. XM_021254359.1 → XP_021110018.1  general transcription factor II-I isoform X8

    UniProtKB/TrEMBL
    A0AAX6SND5, G5C6B0
    Conserved Domains (3) summary
    pfam02946
    Location:523 → 595
    GTF2I; GTF2I-like repeat
    pfam03221
    Location:91 → 159
    HTH_Tnp_Tc5; Tc5 transposase DNA-binding domain
    cl21459
    Location:17 → 70
    HTH; Helix-turn-helix domains

  3. XM_013070479.2 → XP_012925933.2  general transcription factor II-I isoform X7

    UniProtKB/TrEMBL
    A0AAX6QUU6, G5C6B0
    Conserved Domains (3) summary
    pfam02946
    Location:319 → 391
    GTF2I; GTF2I-like repeat
    pfam03221
    Location:91 → 159
    HTH_Tnp_Tc5; Tc5 transposase DNA-binding domain
    cl21459
    Location:17 → 70
    HTH; Helix-turn-helix domains

  4. XM_013070478.2 → XP_012925932.2  general transcription factor II-I isoform X6

    UniProtKB/TrEMBL
    A0AAX6QQ50, G5C6B0
    Conserved Domains (3) summary
    pfam02946
    Location:319 → 391
    GTF2I; GTF2I-like repeat
    pfam03221
    Location:91 → 159
    HTH_Tnp_Tc5; Tc5 transposase DNA-binding domain
    cl21459
    Location:17 → 70
    HTH; Helix-turn-helix domains

  5. XM_013070474.2 → XP_012925928.2  general transcription factor II-I isoform X2

    UniProtKB/TrEMBL
    A0AAX6QQR6, G5C6B0
    Conserved Domains (3) summary
    pfam02946
    Location:319 → 391
    GTF2I; GTF2I-like repeat
    pfam03221
    Location:91 → 159
    HTH_Tnp_Tc5; Tc5 transposase DNA-binding domain
    cl21459
    Location:17 → 70
    HTH; Helix-turn-helix domains

  6. XM_021254358.1 → XP_021110017.1  general transcription factor II-I isoform X5

    UniProtKB/TrEMBL
    A0AAX6SPV3, G5C6B0
    Conserved Domains (3) summary
    pfam02946
    Location:319 → 391
    GTF2I; GTF2I-like repeat
    pfam03221
    Location:91 → 159
    HTH_Tnp_Tc5; Tc5 transposase DNA-binding domain
    cl21459
    Location:17 → 70
    HTH; Helix-turn-helix domains

  7. XM_021254356.1 → XP_021110015.1  general transcription factor II-I isoform X3

    UniProtKB/TrEMBL
    A0AAX6SNI3, G5C6B0
    Conserved Domains (3) summary
    pfam02946
    Location:319 → 391
    GTF2I; GTF2I-like repeat
    pfam03221
    Location:91 → 159
    HTH_Tnp_Tc5; Tc5 transposase DNA-binding domain
    cl21459
    Location:17 → 70
    HTH; Helix-turn-helix domains

  8. XM_013070473.2 → XP_012925927.2  general transcription factor II-I isoform X1

    UniProtKB/TrEMBL
    A0AAX6QVP0, G5C6B0
    Conserved Domains (3) summary
    pfam02946
    Location:319 → 391
    GTF2I; GTF2I-like repeat
    pfam03221
    Location:91 → 159
    HTH_Tnp_Tc5; Tc5 transposase DNA-binding domain
    cl21459
    Location:17 → 70
    HTH; Helix-turn-helix domains

  9. XM_021254354.1 → XP_021110013.1  general transcription factor II-I isoform X1

    UniProtKB/TrEMBL
    A0AAX6QVP0, G5C6B0
    Conserved Domains (3) summary
    pfam02946
    Location:319 → 391
    GTF2I; GTF2I-like repeat
    pfam03221
    Location:91 → 159
    HTH_Tnp_Tc5; Tc5 transposase DNA-binding domain
    cl21459
    Location:17 → 70
    HTH; Helix-turn-helix domains

  10. XM_021254357.1 → XP_021110016.1  general transcription factor II-I isoform X4

    UniProtKB/TrEMBL
    A0AAX6SNC2, G5C6B0
    Conserved Domains (3) summary
    pfam02946
    Location:319 → 391
    GTF2I; GTF2I-like repeat
    pfam03221
    Location:91 → 159
    HTH_Tnp_Tc5; Tc5 transposase DNA-binding domain
    cl21459
    Location:17 → 70
    HTH; Helix-turn-helix domains

RNA

  1. XR_002393244.1 RNA Sequence

  2. XR_002393243.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases