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Ddx19b DEAD-box helicase 19B [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101720257, updated on 1-Mar-2025
Gene symbol
Ddx19b
Gene description
DEAD-box helicase 19B
Locus tag
GW7_15459
See related
Ensembl:ENSHGLG00000009955 RGD:18905006
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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See Ddx19b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624746.1 (12569308..12592168)

NW_004624746.1Genomic Context describing neighboring genes Neighboring gene exosome component 6 Neighboring gene alanyl-tRNA synthetase 1 Neighboring gene ATP-dependent RNA helicase DDX19A Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 2

Genomic Sequence:
NW_004624746 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in poly(A)+ mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic stress granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
ATP-dependent RNA helicase DDX19B

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624746.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    12569308..12592168
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021256709.1 → XP_021112368.1  ATP-dependent RNA helicase DDX19B isoform X1

    UniProtKB/TrEMBL
    A0AAX6SUL8, G5B5W2
    Related
    ENSHGLP00000013929.1, ENSHGLT00000014072.1
    Conserved Domains (1) summary
    COG0513
    Location:86 → 483
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]

  2. XM_004842873.2 → XP_004842930.1  ATP-dependent RNA helicase DDX19B isoform X2

    UniProtKB/TrEMBL
    A0A0P6JB98, G5B5W2
    Related
    ENSHGLP00000013930.1, ENSHGLT00000014073.1
    Conserved Domains (3) summary
    PTZ00424
    Location:91 → 469
    PTZ00424; helicase 45; Provisional
    pfam00271
    Location:318 → 434
    Helicase_C; Helicase conserved C-terminal domain
    cl21455
    Location:94 → 296
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  3. XM_021256710.1 → XP_021112369.1  ATP-dependent RNA helicase DDX19B isoform X3

    UniProtKB/TrEMBL
    A0AAX6SUD8
    Conserved Domains (1) summary
    COG0513
    Location:1 → 369
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
Nucleotide Protein
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