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Smyd1 SET and MYND domain containing 1 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101718535, updated on 1-Mar-2025
Gene symbol
Smyd1
Gene description
SET and MYND domain containing 1
See related
Ensembl:ENSHGLG00000018383 RGD:18924545
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
all
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See Smyd1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624749.1 (16400037..16432956, complement)

NW_004624749.1Genomic Context describing neighboring genes Neighboring gene molybdopterin synthase sulfur carrier subunit-like Neighboring gene fatty acid-binding protein, liver Neighboring gene lysine rich coiled-coil 1 Neighboring gene histone H3-like centromeric protein A

Genomic Sequence:
NW_004624749 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H3K4 methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
histone-lysine N-methyltransferase SMYD1
Names
SET and MYND domain-containing protein 1

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624749.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    16400037..16432956 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004844564.2 → XP_004844621.1  histone-lysine N-methyltransferase SMYD1 isoform X2

    UniProtKB/TrEMBL
    A0AAX6P5U6, G5AQ05
    Related
    ENSHGLP00000025829.1, ENSHGLT00000026058.1
    Conserved Domains (2) summary
    smart00317
    Location:194 → 244
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
    pfam01753
    Location:52 → 90
    zf-MYND; MYND finger

  2. XM_004844563.2 → XP_004844620.1  histone-lysine N-methyltransferase SMYD1 isoform X1

    UniProtKB/TrEMBL
    A0A0P6JCR5, G5AQ05
    Related
    ENSHGLP00000025828.1, ENSHGLT00000026057.1
    Conserved Domains (2) summary
    smart00317
    Location:194 → 257
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
    pfam01753
    Location:52 → 90
    zf-MYND; MYND finger
Nucleotide Protein
Heading Accession and Version

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