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Tut1 terminal uridylyl transferase 1, U6 snRNA-specific [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101716868, updated on 11-Apr-2024

Summary

Gene symbol
Tut1
Gene description
terminal uridylyl transferase 1, U6 snRNA-specific
See related
Ensembl:ENSHGLG00000002742
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
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Genomic context

See Tut1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624926.1 (1113331..1123930, complement)

NW_004624926.1Genomic Context describing neighboring genes Neighboring gene AHNAK nucleoprotein Neighboring gene uncharacterized LOC101716292 Neighboring gene eukaryotic translation elongation factor 1 gamma Neighboring gene metastasis associated 1 family member 2 Neighboring gene EMAP like 3 Neighboring gene retinal outer segment membrane protein 1

Genomic regions, transcripts, and products

Genomic Sequence:
NW_004624926 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

General protein information

Preferred Names
speckle targeted PIP5K1A-regulated poly(A) polymerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624926.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    1113331..1123930 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004874365.3XP_004874422.1  speckle targeted PIP5K1A-regulated poly(A) polymerase isoform X2

    UniProtKB/TrEMBL
    G5AYH3
    Conserved Domains (5) summary
    cd05402
    Location:183397
    NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
    smart00451
    Location:1441
    ZnF_U1; U1-like zinc finger
    COG0724
    Location:56149
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12279
    Location:54127
    RRM_TUT1; RNA recognition motif in speckle targeted PIP5K1A-regulated poly(A) polymerase (Star-PAP) and similar proteins
    pfam03828
    Location:489546
    PAP_assoc; Cid1 family poly A polymerase
  2. XM_004874368.3XP_004874425.1  speckle targeted PIP5K1A-regulated poly(A) polymerase isoform X1

    UniProtKB/TrEMBL
    G5AYH3
    Related
    ENSHGLP00000003724.1, ENSHGLT00000003779.1
    Conserved Domains (5) summary
    cd05402
    Location:183398
    NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
    smart00451
    Location:1441
    ZnF_U1; U1-like zinc finger
    COG0724
    Location:56149
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12279
    Location:54127
    RRM_TUT1; RNA recognition motif in speckle targeted PIP5K1A-regulated poly(A) polymerase (Star-PAP) and similar proteins
    pfam03828
    Location:490547
    PAP_assoc; Cid1 family poly A polymerase
  3. XM_004874367.3XP_004874424.1  speckle targeted PIP5K1A-regulated poly(A) polymerase isoform X3

    UniProtKB/TrEMBL
    G5AYH3
    Conserved Domains (3) summary
    cd05402
    Location:85300
    NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
    pfam03828
    Location:392449
    PAP_assoc; Cid1 family poly A polymerase
    cl17169
    Location:129
    RRM_SF; RNA recognition motif (RRM) superfamily