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Pkd1l2 polycystin-1-like protein 2 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101715670, updated on 6-Sep-2025
Gene symbol
Pkd1l2
Gene description
polycystin-1-like protein 2
See related
RGD:18904392
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
all
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See Pkd1l2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
36
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624746.1 (6187851..6259586)

NW_004624746.1Genomic Context describing neighboring genes Neighboring gene gigaxonin Neighboring gene beta-carotene oxygenase 1 Neighboring gene uncharacterized LOC110348753 Neighboring gene chromosome unknown C16orf46 homolog Neighboring gene glycine cleavage system protein H

Genomic Sequence:
NW_004624746 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in detection of mechanical stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
polycystic kidney disease protein 1-like 2
Names
polycystin 1 like 2
XP_021112150.1

Length

  • 2261

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624746.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    6187851..6259586
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021256491.1 → XP_021112150.1  polycystic kidney disease protein 1-like 2

    UniProtKB/TrEMBL
    A0AAX6SWH1
    Conserved Domains (5) summary
    cd00037
    Location:66 → 182
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    cd01752
    Location:1133 → 1252
    PLAT_polycystin; PLAT/LH2 domain of polycystin-1 like proteins. Polycystins are a large family of membrane proteins composed of multiple domains, present in fish, invertebrates, mammals, and humans that are widely expressed in various cell types and whose biological ...
    pfam02140
    Location:197 → 273
    Gal_Lectin; Galactose binding lectin domain
    cl02559
    Location:1023 → 1062
    GPS; GPCR proteolysis site, GPS, motif
    cl27887
    Location:1774 → 2202
    PKD_channel; Polycystin cation channel
Nucleotide Protein
Heading Accession and Version

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