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Pdpr pyruvate dehydrogenase phosphatase regulatory subunit [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101715422, updated on 1-Mar-2025
Gene symbol
Pdpr
Gene description
pyruvate dehydrogenase phosphatase regulatory subunit
Locus tag
GW7_15463
See related
Ensembl:ENSHGLG00000012857 RGD:18934224
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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See Pdpr in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624746.1 (12426081..12492966, complement)

NW_004624746.1Genomic Context describing neighboring genes Neighboring gene ring finger and WD repeat domain 3 Neighboring gene golgi glycoprotein 1 Neighboring gene uncharacterized LOC110348769 Neighboring gene protein angel homolog 2-like Neighboring gene C-type lectin domain family 18 member C

Genomic Sequence:
NW_004624746 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial
Names
Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624746.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    12426081..12492966 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004842858.3 → XP_004842915.1  pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0AAX6P3A0, G5B5W6
    Conserved Domains (5) summary
    COG0404
    Location:452 → 768
    GcvT; Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism]
    COG0665
    Location:38 → 425
    DadA; Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]
    pfam01571
    Location:462 → 722
    GCV_T; Aminomethyltransferase folate-binding domain
    pfam08669
    Location:686 → 790
    GCV_T_C; Glycine cleavage T-protein C-terminal barrel domain
    pfam16350
    Location:404 → 459
    FAO_M; FAD dependent oxidoreductase central domain

  2. XM_004842857.3 → XP_004842914.1  pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_004842914.1

    UniProtKB/TrEMBL
    A0A0P6JU95, G5B5W6
    Related
    ENSHGLP00000017941.1, ENSHGLT00000018118.1
    Conserved Domains (5) summary
    COG0404
    Location:452 → 829
    GcvT; Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism]
    COG0665
    Location:38 → 425
    DadA; Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]
    pfam01571
    Location:462 → 735
    GCV_T; Aminomethyltransferase folate-binding domain
    pfam08669
    Location:747 → 851
    GCV_T_C; Glycine cleavage T-protein C-terminal barrel domain
    pfam16350
    Location:404 → 459
    FAO_M; FAD dependent oxidoreductase central domain
Nucleotide Protein
Heading Accession and Version

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