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Tdrd3 tudor domain containing 3 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101713672, updated on 1-Mar-2025
Gene symbol
Tdrd3
Gene description
tudor domain containing 3
Locus tag
GW7_04855
See related
Ensembl:ENSHGLG00000018707 RGD:18925294
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
human mouse all
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See Tdrd3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624748.1 (21656003..21815589)

NW_004624748.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110348980 Neighboring gene protein ECT2-like Neighboring gene nascent polypeptide-associated complex subunit alpha pseudogene Neighboring gene WASH complex subunit 4 pseudogene Neighboring gene 39S ribosomal protein L1, mitochondrial pseudogene

Genomic Sequence:
NW_004624748 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
tudor domain-containing protein 3
Names
Tudor domain-containing protein 3

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624748.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    21656003..21815589
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021257929.1 → XP_021113588.1  tudor domain-containing protein 3 isoform X3

    UniProtKB/TrEMBL
    A0AAX6SZ87, G5BCM9
    Conserved Domains (3) summary
    cd04508
    Location:652 → 700
    TUDOR; Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein interactions in which methylated protein substrates bind to these domains. For example, the Tudor domain of Survival of Motor Neuron (SMN) binds to ...
    cd14282
    Location:288 → 326
    UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins
    pfam08585
    Location:8 → 166
    RMI1_N; RecQ mediated genome instability protein

  2. XM_004844279.3 → XP_004844336.1  tudor domain-containing protein 3 isoform X1

    UniProtKB/TrEMBL
    A0AAX6P653
    Related
    ENSHGLP00000026286.1, ENSHGLT00000026521.1
    Conserved Domains (3) summary
    cd04508
    Location:652 → 700
    TUDOR; Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein interactions in which methylated protein substrates bind to these domains. For example, the Tudor domain of Survival of Motor Neuron (SMN) binds to ...
    cd14282
    Location:288 → 326
    UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins
    pfam08585
    Location:15 → 163
    RMI1_N; RecQ mediated genome instability protein

  3. XM_004844280.3 → XP_004844337.1  tudor domain-containing protein 3 isoform X4

    UniProtKB/TrEMBL
    A0AAX6P5I9, G5BCM9
    Conserved Domains (4) summary
    cd04508
    Location:558 → 606
    TUDOR; Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein interactions in which methylated protein substrates bind to these domains. For example, the Tudor domain of Survival of Motor Neuron (SMN) binds to ...
    cd14282
    Location:194 → 232
    UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins
    pfam06003
    Location:521 → 646
    SMN; Survival motor neuron protein (SMN)
    pfam08585
    Location:1 → 72
    RMI1_N; RecQ mediated genome instability protein

  4. XM_021257932.1 → XP_021113591.1  tudor domain-containing protein 3 isoform X4

    UniProtKB/TrEMBL
    A0AAX6P5I9, G5BCM9
    Conserved Domains (4) summary
    cd04508
    Location:558 → 606
    TUDOR; Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein interactions in which methylated protein substrates bind to these domains. For example, the Tudor domain of Survival of Motor Neuron (SMN) binds to ...
    cd14282
    Location:194 → 232
    UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins
    pfam06003
    Location:521 → 646
    SMN; Survival motor neuron protein (SMN)
    pfam08585
    Location:1 → 72
    RMI1_N; RecQ mediated genome instability protein

  5. XM_021257928.1 → XP_021113587.1  tudor domain-containing protein 3 isoform X2

    UniProtKB/TrEMBL
    A0AAX6T0L3, G5BCM9
    Conserved Domains (4) summary
    cd04508
    Location:639 → 687
    TUDOR; Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein interactions in which methylated protein substrates bind to these domains. For example, the Tudor domain of Survival of Motor Neuron (SMN) binds to ...
    cd14282
    Location:275 → 313
    UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins
    pfam06003
    Location:602 → 727
    SMN; Survival motor neuron protein (SMN)
    pfam08585
    Location:2 → 153
    RMI1_N; RecQ mediated genome instability protein

  6. XM_021257930.1 → XP_021113589.1  tudor domain-containing protein 3 isoform X4

    UniProtKB/TrEMBL
    A0AAX6P5I9, G5BCM9
    Conserved Domains (4) summary
    cd04508
    Location:558 → 606
    TUDOR; Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein interactions in which methylated protein substrates bind to these domains. For example, the Tudor domain of Survival of Motor Neuron (SMN) binds to ...
    cd14282
    Location:194 → 232
    UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins
    pfam06003
    Location:521 → 646
    SMN; Survival motor neuron protein (SMN)
    pfam08585
    Location:1 → 72
    RMI1_N; RecQ mediated genome instability protein

  7. XM_021257931.1 → XP_021113590.1  tudor domain-containing protein 3 isoform X5

    UniProtKB/TrEMBL
    A0AAX6T0V2, G5BCM9
    Conserved Domains (4) summary
    cd04508
    Location:551 → 599
    TUDOR; Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein interactions in which methylated protein substrates bind to these domains. For example, the Tudor domain of Survival of Motor Neuron (SMN) binds to ...
    cd14282
    Location:187 → 225
    UBA_TDRD3; UBA domain of Tudor domain-containing protein 3 (TDRD3) and similar proteins
    pfam06003
    Location:514 → 639
    SMN; Survival motor neuron protein (SMN)
    pfam08585
    Location:19 → 65
    RMI1_N; RecQ mediated genome instability protein
Nucleotide Protein
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