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LOC101712830 RNA-binding motif protein, X chromosome-like [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101712830, updated on 1-Mar-2025
Gene symbol
LOC101712830
Gene description
RNA-binding motif protein, X chromosome-like
See related
Ensembl:ENSHGLG00000012325 RGD:18936559
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
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See LOC101712830 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624749.1 (29687288..29692702, complement)

NW_004624749.1Genomic Context describing neighboring genes Neighboring gene actin gamma 2, smooth muscle Neighboring gene STAM binding protein Neighboring gene chromosome unknown C2orf78 homolog Neighboring gene dual specificity phosphatase 11

Genomic Sequence:
NW_004624749 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
RNA-binding motif protein, X chromosome-like

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624749.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    29687288..29692702 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004844718.3 → XP_004844775.1  RNA-binding motif protein, X chromosome-like

    See identical proteins and their annotated locations for XP_004844775.1

    UniProtKB/TrEMBL
    A0AAX6QWS7, G5CAU0
    Conserved Domains (3) summary
    COG0724
    Location:9 → 139
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins
    pfam08081
    Location:173 → 217
    RBM1CTR; RBM1CTR (NUC064) family

  2. XM_013072222.2 → XP_012927676.1  RNA-binding motif protein, X chromosome-like

    See identical proteins and their annotated locations for XP_012927676.1

    UniProtKB/TrEMBL
    A0AAX6QWS7, G5CAU0
    Conserved Domains (3) summary
    COG0724
    Location:9 → 139
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins
    pfam08081
    Location:173 → 217
    RBM1CTR; RBM1CTR (NUC064) family

  3. XM_013072223.1 → XP_012927677.1  RNA-binding motif protein, X chromosome-like

    See identical proteins and their annotated locations for XP_012927677.1

    UniProtKB/TrEMBL
    A0AAX6QWS7, G5CAU0
    Related
    ENSHGLP00000017209.1, ENSHGLT00000017382.1
    Conserved Domains (3) summary
    COG0724
    Location:9 → 139
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins
    pfam08081
    Location:173 → 217
    RBM1CTR; RBM1CTR (NUC064) family
Nucleotide Protein
Heading Accession and Version

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