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Atp6v0d1 ATPase H+ transporting V0 subunit d1 [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101711869, updated on 1-Mar-2025
Gene symbol
Atp6v0d1
Gene description
ATPase H+ transporting V0 subunit d1
See related
Ensembl:ENSHGLG00000011430 RGD:18921099
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
all
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See Atp6v0d1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624746.1 (18828025..18883128)

NW_004624746.1Genomic Context describing neighboring genes Neighboring gene RHO family interacting cell polarization regulator 1 Neighboring gene agouti related neuropeptide Neighboring gene hydroxysteroid 11-beta dehydrogenase 2 Neighboring gene zDHHC palmitoyltransferase 1

Genomic Sequence:
NW_004624746 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vacuolar acidification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vacuolar transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of plasma membrane proton-transporting V-type ATPase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proton-transporting V-type ATPase, V0 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
V-type proton ATPase subunit d 1

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624746.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    18828025..18883128
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021256862.1 → XP_021112521.1  V-type proton ATPase subunit d 1 isoform X1

    UniProtKB/TrEMBL
    A0AAX6SW26, G5C662
    Conserved Domains (1) summary
    pfam01992
    Location:16 → 359
    vATP-synt_AC39; ATP synthase (C/AC39) subunit

  2. XM_021256863.1 → XP_021112522.1  V-type proton ATPase subunit d 1 isoform X1

    UniProtKB/TrEMBL
    A0AAX6SW26, G5C662
    Conserved Domains (1) summary
    pfam01992
    Location:16 → 359
    vATP-synt_AC39; ATP synthase (C/AC39) subunit

  3. XM_021256864.1 → XP_021112523.1  V-type proton ATPase subunit d 1 isoform X1

    UniProtKB/TrEMBL
    A0AAX6SW26, G5C662
    Conserved Domains (1) summary
    pfam01992
    Location:16 → 359
    vATP-synt_AC39; ATP synthase (C/AC39) subunit

  4. XM_004843032.3 → XP_004843089.1  V-type proton ATPase subunit d 1 isoform X2

    See identical proteins and their annotated locations for XP_004843089.1

    UniProtKB/TrEMBL
    A0A0P6JFE6, G5C662
    Related
    ENSHGLP00000015986.1, ENSHGLT00000016154.1
    Conserved Domains (2) summary
    COG1527
    Location:14 → 350
    NtpC; Archaeal/vacuolar-type H+-ATPase subunit C/Vma6 [Energy production and conversion]
    pfam01992
    Location:16 → 345
    vATP-synt_AC39; ATP synthase (C/AC39) subunit
Nucleotide Protein
Heading Accession and Version

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