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Trappc2l trafficking protein particle complex subunit 2L [ Heterocephalus glaber (naked mole-rat) ]

Gene ID: 101711009, updated on 1-Mar-2025
Gene symbol
Trappc2l
Gene description
trafficking protein particle complex subunit 2L
Locus tag
GW7_17352
See related
Ensembl:ENSHGLG00000010329 RGD:18900457
Gene type
protein coding
RefSeq status
MODEL
Organism
Heterocephalus glaber
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus
Orthologs
all
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See Trappc2l in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current HetGla_female_1.0 (GCF_000247695.1) Unplaced Scaffold NW_004624746.1 (781833..786163, complement)

NW_004624746.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110348729 Neighboring gene CBFA2/RUNX1 partner transcriptional co-repressor 3 Neighboring gene PABPN1 like, cytoplasmic Neighboring gene galactosamine (N-acetyl)-6-sulfatase Neighboring gene adenine phosphoribosyltransferase

Genomic Sequence:
NW_004624746 Unplaced Scaffold Reference HetGla_female_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Genome sequencing reveals insights into physiology and longevity of the naked mole rat. Kim EB, et al. Nature, 2011 Oct 12. PMID 21993625, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TRAPP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
trafficking protein particle complex subunit 2-like protein
Names
Trafficking protein particle complex subunit 2-like protein
trafficking protein particle complex 2 like

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RefSeqs of Annotated Genomes: Heterocephalus glaber Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HetGla_female_1.0 Primary Assembly

Genomic

  1. NW_004624746.1 Reference HetGla_female_1.0 Primary Assembly

    Range
    781833..786163 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004842663.2 → XP_004842720.1  trafficking protein particle complex subunit 2-like protein isoform X1

    See identical proteins and their annotated locations for XP_004842720.1

    UniProtKB/TrEMBL
    G5C2T6
    Related
    ENSHGLP00000014425.1, ENSHGLT00000014570.1
    Conserved Domains (1) summary
    pfam04628
    Location:7 → 135
    Sedlin_N; Sedlin, N-terminal conserved region

  2. XM_004842666.3 → XP_004842723.1  trafficking protein particle complex subunit 2-like protein isoform X2

    UniProtKB/TrEMBL
    A0AAX6P3A3
    Conserved Domains (1) summary
    pfam04628
    Location:7 → 114
    Sedlin_N; Sedlin, N-terminal conserved region
Nucleotide Protein
Heading Accession and Version

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